Protein–RNA interactions for Protein: P06323

T-cell receptor alpha chain V region CTL-F3, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06323 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
P06323 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC13.08□□□□□ -0.32
P06323 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
P06323 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
P06323 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P06323 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P06323 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P06323 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
P06323 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
P06323 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.08□□□□□ -0.32
P06323 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P06323 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
P06323 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P06323 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
P06323 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
P06323 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.08□□□□□ -0.32
P06323 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
P06323 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
P06323 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P06323 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
P06323 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P06323 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.08□□□□□ -0.32
P06323 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
P06323 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
P06323 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
P06323 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P06323 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P06323 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
P06323 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
P06323 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
P06323 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P06323 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P06323 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P06323 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P06323 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
P06323 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P06323 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P06323 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
P06323 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P06323 Gm11539-201ENSMUST00000119837 557 ntBASIC13.07□□□□□ -0.32
P06323 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
P06323 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
P06323 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
P06323 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13.07□□□□□ -0.32
P06323 Gm4217-201ENSMUST00000182243 1002 ntBASIC13.07□□□□□ -0.32
P06323 Spcs1-207ENSMUST00000228767 1008 ntBASIC13.07□□□□□ -0.32
P06323 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
P06323 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
P06323 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
P06323 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
P06323 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P06323 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P06323 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P06323 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P06323 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P06323 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
P06323 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P06323 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P06323 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
P06323 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P06323 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P06323 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
P06323 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
P06323 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P06323 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
P06323 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
P06323 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
P06323 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P06323 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
P06323 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P06323 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.06□□□□□ -0.32
P06323 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P06323 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P06323 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
P06323 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
P06323 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
P06323 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P06323 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P06323 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P06323 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
P06323 Gm13474-201ENSMUST00000122466 815 ntBASIC13.06□□□□□ -0.32
P06323 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC13.06□□□□□ -0.32
P06323 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC13.06□□□□□ -0.32
P06323 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC13.06□□□□□ -0.32
P06323 Gm27011-201ENSMUST00000182352 972 ntBASIC13.06□□□□□ -0.32
P06323 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC13.06□□□□□ -0.32
P06323 Gm2274-201ENSMUST00000184539 609 ntBASIC13.06□□□□□ -0.32
P06323 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC13.06□□□□□ -0.32
P06323 Gm18115-201ENSMUST00000221209 621 ntBASIC13.06□□□□□ -0.32
P06323 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
P06323 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
P06323 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
P06323 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
P06323 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
P06323 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P06323 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
P06323 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P06323 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P06323 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC13.06□□□□□ -0.32
P06323 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms