Protein–RNA interactions for Protein: P04214

T-cell receptor beta chain V region E1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04214 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
P04214 Gm13127-201ENSMUST00000118978 1389 ntBASIC16.82■□□□□ 0.28
P04214 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
P04214 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
P04214 Gm12892-201ENSMUST00000117367 1146 ntBASIC16.82■□□□□ 0.28
P04214 Gm13365-201ENSMUST00000121188 973 ntBASIC16.82■□□□□ 0.28
P04214 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC16.82■□□□□ 0.28
P04214 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.82■□□□□ 0.28
P04214 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.82■□□□□ 0.28
P04214 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P04214 Gm5312-201ENSMUST00000203728 547 ntBASIC16.82■□□□□ 0.28
P04214 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P04214 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
P04214 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.82■□□□□ 0.28
P04214 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P04214 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
P04214 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P04214 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
P04214 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
P04214 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P04214 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.82■□□□□ 0.28
P04214 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
P04214 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.81■□□□□ 0.28
P04214 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
P04214 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P04214 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P04214 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
P04214 Gm15427-201ENSMUST00000117288 531 ntBASIC16.81■□□□□ 0.28
P04214 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.81■□□□□ 0.28
P04214 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC16.81■□□□□ 0.28
P04214 Gm44335-201ENSMUST00000196879 141 ntBASIC16.81■□□□□ 0.28
P04214 Gm44297-201ENSMUST00000198304 141 ntBASIC16.81■□□□□ 0.28
P04214 Gm44346-201ENSMUST00000198851 141 ntBASIC16.81■□□□□ 0.28
P04214 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P04214 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P04214 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P04214 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P04214 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P04214 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
P04214 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P04214 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P04214 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P04214 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P04214 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.81■□□□□ 0.28
P04214 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
P04214 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
P04214 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
P04214 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.8■□□□□ 0.28
P04214 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.8■□□□□ 0.28
P04214 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
P04214 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC16.8■□□□□ 0.28
P04214 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
P04214 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC16.8■□□□□ 0.28
P04214 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.8■□□□□ 0.28
P04214 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.8■□□□□ 0.28
P04214 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
P04214 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
P04214 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
P04214 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
P04214 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
P04214 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
P04214 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P04214 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.79■□□□□ 0.28
P04214 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.79■□□□□ 0.28
P04214 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P04214 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P04214 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
P04214 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
P04214 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC16.79■□□□□ 0.28
P04214 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
P04214 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.79■□□□□ 0.28
P04214 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
P04214 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
P04214 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
P04214 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P04214 Gm5177-201ENSMUST00000183092 997 ntBASIC16.79■□□□□ 0.28
P04214 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.79■□□□□ 0.28
P04214 Gm27301-201ENSMUST00000184012 127 ntBASIC16.79■□□□□ 0.28
P04214 Gm19164-201ENSMUST00000210667 640 ntBASIC16.79■□□□□ 0.28
P04214 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P04214 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P04214 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.79■□□□□ 0.28
P04214 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P04214 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P04214 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P04214 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
P04214 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P04214 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P04214 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P04214 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P04214 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P04214 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
P04214 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
P04214 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P04214 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
P04214 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
P04214 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
P04214 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P04214 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P04214 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms