Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Krt1P04104 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Krt1P04104 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Krt1P04104 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Krt1P04104 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Krt1P04104 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.32■□□□□ 0.04
Krt1P04104 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Krt1P04104 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Krt1P04104 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Krt1P04104 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.32■□□□□ 0.04
Krt1P04104 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Krt1P04104 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Krt1P04104 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Krt1P04104 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Krt1P04104 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Krt1P04104 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Krt1P04104 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Krt1P04104 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Krt1P04104 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Krt1P04104 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Krt1P04104 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Krt1P04104 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Krt1P04104 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Krt1P04104 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Krt1P04104 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Krt1P04104 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.31■□□□□ 0.04
Krt1P04104 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Krt1P04104 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Krt1P04104 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Krt1P04104 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Krt1P04104 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Krt1P04104 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Krt1P04104 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Krt1P04104 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Krt1P04104 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Krt1P04104 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Krt1P04104 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Krt1P04104 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.3■□□□□ 0.04
Krt1P04104 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Krt1P04104 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Krt1P04104 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Krt1P04104 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Krt1P04104 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Krt1P04104 Gm27000-201ENSMUST00000182943 842 ntBASIC15.3■□□□□ 0.04
Krt1P04104 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Krt1P04104 Gm37025-201ENSMUST00000195159 829 ntBASIC15.3■□□□□ 0.04
Krt1P04104 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC15.3■□□□□ 0.04
Krt1P04104 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Krt1P04104 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Krt1P04104 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Krt1P04104 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Krt1P04104 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Krt1P04104 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Krt1P04104 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Krt1P04104 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.3■□□□□ 0.04
Krt1P04104 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Krt1P04104 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Krt1P04104 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Krt1P04104 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.29■□□□□ 0.04
Krt1P04104 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Krt1P04104 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Krt1P04104 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Krt1P04104 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Krt1P04104 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Krt1P04104 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Krt1P04104 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Krt1P04104 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Krt1P04104 Gm24841-201ENSMUST00000158676 357 ntBASIC15.29■□□□□ 0.04
Krt1P04104 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Krt1P04104 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC15.29■□□□□ 0.04
Krt1P04104 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC15.29■□□□□ 0.04
Krt1P04104 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.29■□□□□ 0.04
Krt1P04104 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Krt1P04104 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Krt1P04104 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.29■□□□□ 0.04
Krt1P04104 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Krt1P04104 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Krt1P04104 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Krt1P04104 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Krt1P04104 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Krt1P04104 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Krt1P04104 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Krt1P04104 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Krt1P04104 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Krt1P04104 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Krt1P04104 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.29■□□□□ 0.04
Krt1P04104 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Krt1P04104 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Krt1P04104 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Krt1P04104 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.28■□□□□ 0.04
Krt1P04104 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Krt1P04104 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Krt1P04104 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Krt1P04104 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Krt1P04104 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Krt1P04104 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Krt1P04104 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Krt1P04104 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Krt1P04104 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Krt1P04104 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms