Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC13.52□□□□□ -0.25
Hoxa3P02831 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa3P02831 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Hoxa3P02831 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa3P02831 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa3P02831 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa3P02831 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa3P02831 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa3P02831 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa3P02831 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa3P02831 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Hoxa3P02831 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa3P02831 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Hoxa3P02831 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa3P02831 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa3P02831 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa3P02831 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.51□□□□□ -0.25
Hoxa3P02831 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa3P02831 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa3P02831 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa3P02831 Gm15442-201ENSMUST00000117905 1527 ntBASIC13.51□□□□□ -0.25
Hoxa3P02831 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa3P02831 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13.51□□□□□ -0.25
Hoxa3P02831 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13.51□□□□□ -0.25
Hoxa3P02831 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa3P02831 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa3P02831 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa3P02831 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa3P02831 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa3P02831 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa3P02831 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa3P02831 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa3P02831 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa3P02831 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa3P02831 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.5□□□□□ -0.25
Hoxa3P02831 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa3P02831 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Hoxa3P02831 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa3P02831 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa3P02831 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa3P02831 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa3P02831 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa3P02831 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.5□□□□□ -0.25
Hoxa3P02831 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
Hoxa3P02831 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.5□□□□□ -0.25
Hoxa3P02831 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.5□□□□□ -0.25
Hoxa3P02831 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC13.5□□□□□ -0.25
Hoxa3P02831 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Hoxa3P02831 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Hoxa3P02831 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Hoxa3P02831 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Hoxa3P02831 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.5□□□□□ -0.25
Hoxa3P02831 AC107711.5-202ENSMUST00000226429 702 ntBASIC13.5□□□□□ -0.25
Hoxa3P02831 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Hoxa3P02831 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa3P02831 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa3P02831 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa3P02831 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxa3P02831 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxa3P02831 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxa3P02831 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxa3P02831 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxa3P02831 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxa3P02831 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxa3P02831 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxa3P02831 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxa3P02831 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxa3P02831 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxa3P02831 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.49□□□□□ -0.25
Hoxa3P02831 Gm27459-201ENSMUST00000184860 107 ntBASIC13.49□□□□□ -0.25
Hoxa3P02831 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC13.49□□□□□ -0.25
Hoxa3P02831 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxa3P02831 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC13.49□□□□□ -0.25
Hoxa3P02831 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxa3P02831 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxa3P02831 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Hoxa3P02831 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxa3P02831 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxa3P02831 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxa3P02831 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxa3P02831 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.48□□□□□ -0.25
Hoxa3P02831 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxa3P02831 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxa3P02831 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxa3P02831 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxa3P02831 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.48□□□□□ -0.25
Hoxa3P02831 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxa3P02831 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxa3P02831 Gm13312-201ENSMUST00000119631 718 ntBASIC13.48□□□□□ -0.25
Hoxa3P02831 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxa3P02831 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxa3P02831 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxa3P02831 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC13.48□□□□□ -0.25
Hoxa3P02831 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxa3P02831 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxa3P02831 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxa3P02831 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.48□□□□□ -0.25
Hoxa3P02831 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxa3P02831 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxa3P02831 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms