Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn1O88551 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn1O88551 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn1O88551 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn1O88551 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn1O88551 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn1O88551 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn1O88551 Gm25990-201ENSMUST00000102440 86 ntBASIC13.81□□□□□ -0.2
Cldn1O88551 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.81□□□□□ -0.2
Cldn1O88551 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn1O88551 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.81□□□□□ -0.2
Cldn1O88551 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn1O88551 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.81□□□□□ -0.2
Cldn1O88551 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn1O88551 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Cldn1O88551 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn1O88551 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn1O88551 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn1O88551 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn1O88551 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn1O88551 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn1O88551 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.81□□□□□ -0.2
Cldn1O88551 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Cldn1O88551 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.81□□□□□ -0.2
Cldn1O88551 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Cldn1O88551 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn1O88551 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn1O88551 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn1O88551 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn1O88551 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn1O88551 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.8□□□□□ -0.2
Cldn1O88551 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.8□□□□□ -0.2
Cldn1O88551 Gm13418-201ENSMUST00000119097 944 ntBASIC13.8□□□□□ -0.2
Cldn1O88551 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Cldn1O88551 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.8□□□□□ -0.2
Cldn1O88551 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.8□□□□□ -0.2
Cldn1O88551 Gm7230-201ENSMUST00000173026 815 ntBASIC13.8□□□□□ -0.2
Cldn1O88551 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.8□□□□□ -0.2
Cldn1O88551 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.8□□□□□ -0.2
Cldn1O88551 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.8□□□□□ -0.2
Cldn1O88551 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.8□□□□□ -0.2
Cldn1O88551 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn1O88551 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Cldn1O88551 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn1O88551 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn1O88551 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn1O88551 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Cldn1O88551 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Cldn1O88551 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn1O88551 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn1O88551 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn1O88551 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Cldn1O88551 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13.8□□□□□ -0.2
Cldn1O88551 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.8□□□□□ -0.2
Cldn1O88551 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC13.8□□□□□ -0.2
Cldn1O88551 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn1O88551 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn1O88551 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn1O88551 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cldn1O88551 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cldn1O88551 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cldn1O88551 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cldn1O88551 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Cldn1O88551 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cldn1O88551 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cldn1O88551 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cldn1O88551 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cldn1O88551 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cldn1O88551 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.79□□□□□ -0.2
Cldn1O88551 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.79□□□□□ -0.2
Cldn1O88551 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.79□□□□□ -0.2
Cldn1O88551 Auts2-212ENSMUST00000178555 309 ntBASIC13.79□□□□□ -0.2
Cldn1O88551 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cldn1O88551 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cldn1O88551 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cldn1O88551 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cldn1O88551 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cldn1O88551 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cldn1O88551 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cldn1O88551 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Cldn1O88551 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cldn1O88551 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cldn1O88551 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cldn1O88551 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cldn1O88551 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cldn1O88551 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cldn1O88551 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cldn1O88551 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cldn1O88551 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cldn1O88551 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cldn1O88551 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cldn1O88551 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cldn1O88551 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cldn1O88551 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cldn1O88551 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cldn1O88551 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Cldn1O88551 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cldn1O88551 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Cldn1O88551 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Cldn1O88551 Gm25745-201ENSMUST00000174945 133 ntBASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms