Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC14.93□□□□□ -0.02
Cops4O88544 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cops4O88544 Gm37025-201ENSMUST00000195159 829 ntBASIC14.93□□□□□ -0.02
Cops4O88544 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cops4O88544 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC14.93□□□□□ -0.02
Cops4O88544 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC14.93□□□□□ -0.02
Cops4O88544 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cops4O88544 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
Cops4O88544 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cops4O88544 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Cops4O88544 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cops4O88544 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cops4O88544 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cops4O88544 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cops4O88544 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Cops4O88544 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cops4O88544 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cops4O88544 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Cops4O88544 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cops4O88544 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cops4O88544 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
Cops4O88544 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cops4O88544 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cops4O88544 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cops4O88544 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cops4O88544 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cops4O88544 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Cops4O88544 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cops4O88544 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cops4O88544 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cops4O88544 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cops4O88544 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cops4O88544 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cops4O88544 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cops4O88544 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cops4O88544 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cops4O88544 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cops4O88544 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cops4O88544 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Cops4O88544 App-207ENSMUST00000227737 2827 ntBASIC14.92□□□□□ -0.02
Cops4O88544 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cops4O88544 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cops4O88544 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cops4O88544 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cops4O88544 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cops4O88544 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Cops4O88544 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cops4O88544 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Cops4O88544 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cops4O88544 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Cops4O88544 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cops4O88544 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cops4O88544 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cops4O88544 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cops4O88544 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cops4O88544 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cops4O88544 Gm12669-201ENSMUST00000122162 1009 ntBASIC14.91□□□□□ -0.02
Cops4O88544 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC14.91□□□□□ -0.02
Cops4O88544 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cops4O88544 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cops4O88544 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.91□□□□□ -0.02
Cops4O88544 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cops4O88544 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cops4O88544 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cops4O88544 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cops4O88544 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cops4O88544 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cops4O88544 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cops4O88544 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cops4O88544 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cops4O88544 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cops4O88544 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cops4O88544 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Cops4O88544 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cops4O88544 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.9□□□□□ -0.02
Cops4O88544 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cops4O88544 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cops4O88544 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cops4O88544 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cops4O88544 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cops4O88544 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cops4O88544 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cops4O88544 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cops4O88544 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cops4O88544 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cops4O88544 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cops4O88544 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Cops4O88544 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cops4O88544 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cops4O88544 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cops4O88544 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.9□□□□□ -0.02
Cops4O88544 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cops4O88544 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cops4O88544 Sybu-209ENSMUST00000228639 4113 ntBASIC14.9□□□□□ -0.02
Cops4O88544 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cops4O88544 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cops4O88544 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cops4O88544 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cops4O88544 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cops4O88544 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms