Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1hO88427 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1hO88427 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1hO88427 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1hO88427 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1hO88427 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1hO88427 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC15.66■□□□□ 0.1
Cacna1hO88427 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC15.66■□□□□ 0.1
Cacna1hO88427 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1hO88427 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC15.66■□□□□ 0.1
Cacna1hO88427 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Cacna1hO88427 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1hO88427 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1hO88427 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1hO88427 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Cacna1hO88427 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1hO88427 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1hO88427 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1hO88427 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1hO88427 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cacna1hO88427 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Cacna1hO88427 Gm10253-201ENSMUST00000194270 940 ntBASIC15.65■□□□□ 0.1
Cacna1hO88427 Gm44855-201ENSMUST00000205725 362 ntBASIC15.65■□□□□ 0.1
Cacna1hO88427 Gm18057-201ENSMUST00000208220 503 ntBASIC15.65■□□□□ 0.1
Cacna1hO88427 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cacna1hO88427 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cacna1hO88427 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cacna1hO88427 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cacna1hO88427 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
Cacna1hO88427 Gm9385-201ENSMUST00000117563 472 ntBASIC15.65■□□□□ 0.1
Cacna1hO88427 Gm13453-201ENSMUST00000118708 357 ntBASIC15.65■□□□□ 0.1
Cacna1hO88427 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cacna1hO88427 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cacna1hO88427 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cacna1hO88427 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Cacna1hO88427 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Cacna1hO88427 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cacna1hO88427 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cacna1hO88427 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cacna1hO88427 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cacna1hO88427 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cacna1hO88427 Gm27618-201ENSMUST00000183671 60 ntBASIC15.64■□□□□ 0.09
Cacna1hO88427 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.64■□□□□ 0.09
Cacna1hO88427 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Cacna1hO88427 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cacna1hO88427 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Cacna1hO88427 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cacna1hO88427 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.64■□□□□ 0.09
Cacna1hO88427 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Cacna1hO88427 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cacna1hO88427 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cacna1hO88427 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cacna1hO88427 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cacna1hO88427 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cacna1hO88427 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cacna1hO88427 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cacna1hO88427 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cacna1hO88427 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Cacna1hO88427 Gm15693-201ENSMUST00000120470 637 ntBASIC15.64■□□□□ 0.09
Cacna1hO88427 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.64■□□□□ 0.09
Cacna1hO88427 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cacna1hO88427 AC124732.1-201ENSMUST00000221551 910 ntBASIC15.64■□□□□ 0.09
Cacna1hO88427 Rbfox2-208ENSMUST00000227930 1218 ntBASIC15.64■□□□□ 0.09
Cacna1hO88427 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cacna1hO88427 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cacna1hO88427 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cacna1hO88427 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cacna1hO88427 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cacna1hO88427 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cacna1hO88427 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC15.63■□□□□ 0.09
Cacna1hO88427 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC15.63■□□□□ 0.09
Cacna1hO88427 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.63■□□□□ 0.09
Cacna1hO88427 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC15.63■□□□□ 0.09
Cacna1hO88427 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cacna1hO88427 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cacna1hO88427 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cacna1hO88427 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cacna1hO88427 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cacna1hO88427 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC15.63■□□□□ 0.09
Cacna1hO88427 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cacna1hO88427 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cacna1hO88427 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cacna1hO88427 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Cacna1hO88427 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cacna1hO88427 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cacna1hO88427 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.63■□□□□ 0.09
Cacna1hO88427 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Cacna1hO88427 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cacna1hO88427 Gm38294-201ENSMUST00000192831 381 ntBASIC15.62■□□□□ 0.09
Cacna1hO88427 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cacna1hO88427 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cacna1hO88427 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cacna1hO88427 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cacna1hO88427 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cacna1hO88427 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cacna1hO88427 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cacna1hO88427 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cacna1hO88427 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cacna1hO88427 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cacna1hO88427 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms