Protein–RNA interactions for Protein: O88255

Gm10509, Mszf57 (Fragment), mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10509O88255 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Gm10509O88255 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Gm10509O88255 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Gm10509O88255 Gm44729-201ENSMUST00000206759 2052 ntBASIC11.52□□□□□ -0.57
Gm10509O88255 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gm10509O88255 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC11.52□□□□□ -0.57
Gm10509O88255 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gm10509O88255 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gm10509O88255 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gm10509O88255 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Gm10509O88255 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Gm10509O88255 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Gm10509O88255 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
Gm10509O88255 Prob1-201ENSMUST00000097619 3021 ntBASIC11.52□□□□□ -0.57
Gm10509O88255 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gm10509O88255 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gm10509O88255 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gm10509O88255 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Gm10509O88255 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Gm10509O88255 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Gm10509O88255 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Gm10509O88255 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gm10509O88255 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gm10509O88255 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gm10509O88255 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gm10509O88255 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm10509O88255 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Gm10509O88255 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm10509O88255 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm10509O88255 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm10509O88255 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm10509O88255 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm10509O88255 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Gm10509O88255 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm10509O88255 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm10509O88255 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm10509O88255 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Gm10509O88255 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm10509O88255 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm10509O88255 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm10509O88255 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Gm10509O88255 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm10509O88255 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC11.51□□□□□ -0.57
Gm10509O88255 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Gm10509O88255 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC11.51□□□□□ -0.57
Gm10509O88255 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm10509O88255 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Gm10509O88255 Gm7889-201ENSMUST00000185591 958 ntBASIC11.51□□□□□ -0.57
Gm10509O88255 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Gm10509O88255 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC11.51□□□□□ -0.57
Gm10509O88255 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm10509O88255 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm10509O88255 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm10509O88255 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Gm10509O88255 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm10509O88255 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Gm10509O88255 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm10509O88255 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Gm10509O88255 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm10509O88255 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm10509O88255 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm10509O88255 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Gm10509O88255 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Gm10509O88255 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm10509O88255 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm10509O88255 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm10509O88255 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm10509O88255 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm10509O88255 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Gm10509O88255 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC11.5□□□□□ -0.57
Gm10509O88255 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm10509O88255 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm10509O88255 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC11.5□□□□□ -0.57
Gm10509O88255 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm10509O88255 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm10509O88255 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Gm10509O88255 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm10509O88255 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Gm10509O88255 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm10509O88255 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm10509O88255 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm10509O88255 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Gm10509O88255 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
Gm10509O88255 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm10509O88255 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Gm10509O88255 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC11.5□□□□□ -0.57
Gm10509O88255 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC11.5□□□□□ -0.57
Gm10509O88255 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC11.5□□□□□ -0.57
Gm10509O88255 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC11.5□□□□□ -0.57
Gm10509O88255 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Gm10509O88255 Gm27389-201ENSMUST00000183622 195 ntBASIC11.5□□□□□ -0.57
Gm10509O88255 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC11.5□□□□□ -0.57
Gm10509O88255 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC11.5□□□□□ -0.57
Gm10509O88255 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm10509O88255 AC134329.2-201ENSMUST00000217897 428 ntBASIC11.5□□□□□ -0.57
Gm10509O88255 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Gm10509O88255 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm10509O88255 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm10509O88255 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm10509O88255 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms