Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pfdn2O70591 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pfdn2O70591 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Pfdn2O70591 Alkbh1-212ENSMUST00000185301 408 ntBASIC13.47□□□□□ -0.25
Pfdn2O70591 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pfdn2O70591 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pfdn2O70591 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pfdn2O70591 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pfdn2O70591 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Pfdn2O70591 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pfdn2O70591 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pfdn2O70591 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Pfdn2O70591 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pfdn2O70591 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pfdn2O70591 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Pfdn2O70591 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pfdn2O70591 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pfdn2O70591 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pfdn2O70591 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pfdn2O70591 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
Pfdn2O70591 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Pfdn2O70591 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pfdn2O70591 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pfdn2O70591 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pfdn2O70591 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.46□□□□□ -0.25
Pfdn2O70591 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pfdn2O70591 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pfdn2O70591 Gm19721-201ENSMUST00000195284 1764 ntBASIC13.46□□□□□ -0.25
Pfdn2O70591 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pfdn2O70591 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pfdn2O70591 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pfdn2O70591 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pfdn2O70591 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.46□□□□□ -0.25
Pfdn2O70591 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC13.46□□□□□ -0.25
Pfdn2O70591 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pfdn2O70591 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pfdn2O70591 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pfdn2O70591 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pfdn2O70591 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pfdn2O70591 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pfdn2O70591 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pfdn2O70591 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pfdn2O70591 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pfdn2O70591 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pfdn2O70591 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC13.46□□□□□ -0.26
Pfdn2O70591 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pfdn2O70591 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Pfdn2O70591 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Pfdn2O70591 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Pfdn2O70591 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.46□□□□□ -0.26
Pfdn2O70591 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Pfdn2O70591 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pfdn2O70591 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pfdn2O70591 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pfdn2O70591 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pfdn2O70591 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC13.45□□□□□ -0.26
Pfdn2O70591 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
Pfdn2O70591 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
Pfdn2O70591 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pfdn2O70591 Gm45560-201ENSMUST00000211492 1472 ntBASIC13.45□□□□□ -0.26
Pfdn2O70591 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pfdn2O70591 Gm18666-201ENSMUST00000190039 958 ntBASIC13.45□□□□□ -0.26
Pfdn2O70591 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC13.45□□□□□ -0.26
Pfdn2O70591 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC13.45□□□□□ -0.26
Pfdn2O70591 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pfdn2O70591 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pfdn2O70591 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pfdn2O70591 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Pfdn2O70591 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pfdn2O70591 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pfdn2O70591 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Pfdn2O70591 Gm10654-201ENSMUST00000098653 1633 ntBASIC13.45□□□□□ -0.26
Pfdn2O70591 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Pfdn2O70591 Gm43859-201ENSMUST00000200075 1412 ntBASIC13.45□□□□□ -0.26
Pfdn2O70591 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pfdn2O70591 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pfdn2O70591 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pfdn2O70591 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pfdn2O70591 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pfdn2O70591 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pfdn2O70591 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
Pfdn2O70591 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Pfdn2O70591 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pfdn2O70591 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pfdn2O70591 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pfdn2O70591 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pfdn2O70591 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pfdn2O70591 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pfdn2O70591 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Pfdn2O70591 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.44□□□□□ -0.26
Pfdn2O70591 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
Pfdn2O70591 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pfdn2O70591 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pfdn2O70591 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pfdn2O70591 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pfdn2O70591 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pfdn2O70591 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pfdn2O70591 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Pfdn2O70591 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pfdn2O70591 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms