Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rdh5O55240 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Rdh5O55240 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rdh5O55240 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rdh5O55240 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rdh5O55240 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rdh5O55240 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rdh5O55240 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rdh5O55240 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Rdh5O55240 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.29■□□□□ 0.04
Rdh5O55240 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rdh5O55240 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Rdh5O55240 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rdh5O55240 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rdh5O55240 Gm10052-201ENSMUST00000168019 960 ntBASIC15.29■□□□□ 0.04
Rdh5O55240 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.29■□□□□ 0.04
Rdh5O55240 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Rdh5O55240 Gm7729-201ENSMUST00000050143 801 ntBASIC15.29■□□□□ 0.04
Rdh5O55240 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rdh5O55240 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rdh5O55240 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rdh5O55240 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rdh5O55240 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rdh5O55240 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rdh5O55240 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.29■□□□□ 0.04
Rdh5O55240 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rdh5O55240 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Rdh5O55240 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rdh5O55240 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rdh5O55240 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rdh5O55240 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rdh5O55240 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rdh5O55240 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rdh5O55240 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rdh5O55240 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rdh5O55240 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rdh5O55240 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.28■□□□□ 0.04
Rdh5O55240 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rdh5O55240 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rdh5O55240 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rdh5O55240 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rdh5O55240 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rdh5O55240 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.28■□□□□ 0.04
Rdh5O55240 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rdh5O55240 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rdh5O55240 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rdh5O55240 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rdh5O55240 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rdh5O55240 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
Rdh5O55240 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rdh5O55240 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rdh5O55240 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rdh5O55240 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rdh5O55240 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rdh5O55240 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.27■□□□□ 0.04
Rdh5O55240 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rdh5O55240 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rdh5O55240 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rdh5O55240 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.27■□□□□ 0.04
Rdh5O55240 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rdh5O55240 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Rdh5O55240 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Rdh5O55240 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rdh5O55240 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rdh5O55240 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Rdh5O55240 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rdh5O55240 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rdh5O55240 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rdh5O55240 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rdh5O55240 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rdh5O55240 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rdh5O55240 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Rdh5O55240 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rdh5O55240 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rdh5O55240 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.26■□□□□ 0.03
Rdh5O55240 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rdh5O55240 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rdh5O55240 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Rdh5O55240 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.26■□□□□ 0.03
Rdh5O55240 Gm7284-201ENSMUST00000131667 944 ntBASIC15.26■□□□□ 0.03
Rdh5O55240 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rdh5O55240 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
Rdh5O55240 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rdh5O55240 Gm44430-201ENSMUST00000203376 995 ntBASIC15.26■□□□□ 0.03
Rdh5O55240 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Rdh5O55240 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rdh5O55240 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rdh5O55240 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rdh5O55240 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Rdh5O55240 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rdh5O55240 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rdh5O55240 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rdh5O55240 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Rdh5O55240 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rdh5O55240 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rdh5O55240 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rdh5O55240 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rdh5O55240 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.26■□□□□ 0.03
Rdh5O55240 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rdh5O55240 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms