Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Rpl35aO55142 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rpl35aO55142 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rpl35aO55142 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Rpl35aO55142 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpl35aO55142 Gm7729-201ENSMUST00000050143 801 ntBASIC12.02□□□□□ -0.49
Rpl35aO55142 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpl35aO55142 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpl35aO55142 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpl35aO55142 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpl35aO55142 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpl35aO55142 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpl35aO55142 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rpl35aO55142 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpl35aO55142 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpl35aO55142 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpl35aO55142 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpl35aO55142 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpl35aO55142 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl35aO55142 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl35aO55142 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl35aO55142 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl35aO55142 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl35aO55142 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl35aO55142 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl35aO55142 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC12.01□□□□□ -0.49
Rpl35aO55142 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC12.01□□□□□ -0.49
Rpl35aO55142 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl35aO55142 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl35aO55142 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl35aO55142 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl35aO55142 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl35aO55142 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl35aO55142 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl35aO55142 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl35aO55142 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Rpl35aO55142 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Rpl35aO55142 Olfr129-201ENSMUST00000122318 993 ntBASIC12.01□□□□□ -0.49
Rpl35aO55142 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl35aO55142 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Rpl35aO55142 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Rpl35aO55142 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl35aO55142 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl35aO55142 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl35aO55142 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl35aO55142 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl35aO55142 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl35aO55142 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl35aO55142 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl35aO55142 Gm15442-201ENSMUST00000117905 1527 ntBASIC12.01□□□□□ -0.49
Rpl35aO55142 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl35aO55142 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rpl35aO55142 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rpl35aO55142 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Rpl35aO55142 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rpl35aO55142 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rpl35aO55142 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rpl35aO55142 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Rpl35aO55142 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rpl35aO55142 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC12□□□□□ -0.49
Rpl35aO55142 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Rpl35aO55142 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC12□□□□□ -0.49
Rpl35aO55142 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC12□□□□□ -0.49
Rpl35aO55142 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Rpl35aO55142 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rpl35aO55142 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rpl35aO55142 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC12□□□□□ -0.49
Rpl35aO55142 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC12□□□□□ -0.49
Rpl35aO55142 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rpl35aO55142 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rpl35aO55142 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rpl35aO55142 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rpl35aO55142 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC12□□□□□ -0.49
Rpl35aO55142 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rpl35aO55142 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rpl35aO55142 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Rpl35aO55142 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rpl35aO55142 Gm36858-201ENSMUST00000194501 2391 ntBASIC12□□□□□ -0.49
Rpl35aO55142 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rpl35aO55142 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Rpl35aO55142 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Rpl35aO55142 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Rpl35aO55142 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rpl35aO55142 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rpl35aO55142 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Rpl35aO55142 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rpl35aO55142 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rpl35aO55142 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rpl35aO55142 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rpl35aO55142 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rpl35aO55142 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rpl35aO55142 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rpl35aO55142 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Rpl35aO55142 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rpl35aO55142 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rpl35aO55142 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rpl35aO55142 Gm15794-201ENSMUST00000120182 631 ntBASIC11.99□□□□□ -0.49
Rpl35aO55142 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC11.99□□□□□ -0.49
Rpl35aO55142 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC11.99□□□□□ -0.49
Rpl35aO55142 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms