Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pde6dO55057 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pde6dO55057 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pde6dO55057 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pde6dO55057 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pde6dO55057 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Pde6dO55057 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pde6dO55057 Gm15847-201ENSMUST00000121417 1065 ntBASIC12.77□□□□□ -0.37
Pde6dO55057 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC12.77□□□□□ -0.37
Pde6dO55057 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC12.77□□□□□ -0.37
Pde6dO55057 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pde6dO55057 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pde6dO55057 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pde6dO55057 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pde6dO55057 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Pde6dO55057 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.77□□□□□ -0.37
Pde6dO55057 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pde6dO55057 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pde6dO55057 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pde6dO55057 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Pde6dO55057 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pde6dO55057 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Pde6dO55057 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Pde6dO55057 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6dO55057 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Pde6dO55057 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6dO55057 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6dO55057 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6dO55057 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6dO55057 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC12.76□□□□□ -0.37
Pde6dO55057 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Pde6dO55057 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6dO55057 Gm6365-201ENSMUST00000054711 744 ntBASIC12.76□□□□□ -0.37
Pde6dO55057 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6dO55057 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6dO55057 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Pde6dO55057 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6dO55057 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC12.76□□□□□ -0.37
Pde6dO55057 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6dO55057 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6dO55057 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Pde6dO55057 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6dO55057 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6dO55057 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6dO55057 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6dO55057 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6dO55057 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6dO55057 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6dO55057 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6dO55057 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6dO55057 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6dO55057 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.76□□□□□ -0.37
Pde6dO55057 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6dO55057 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6dO55057 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Pde6dO55057 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pde6dO55057 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pde6dO55057 Gm7290-201ENSMUST00000104990 617 ntBASIC12.75□□□□□ -0.37
Pde6dO55057 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pde6dO55057 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC12.75□□□□□ -0.37
Pde6dO55057 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pde6dO55057 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pde6dO55057 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pde6dO55057 Gm12918-201ENSMUST00000120234 636 ntBASIC12.75□□□□□ -0.37
Pde6dO55057 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pde6dO55057 Gm15710-201ENSMUST00000121821 636 ntBASIC12.75□□□□□ -0.37
Pde6dO55057 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC12.75□□□□□ -0.37
Pde6dO55057 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC12.75□□□□□ -0.37
Pde6dO55057 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC12.75□□□□□ -0.37
Pde6dO55057 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pde6dO55057 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pde6dO55057 Gm37025-201ENSMUST00000195159 829 ntBASIC12.75□□□□□ -0.37
Pde6dO55057 Gm5075-201ENSMUST00000196916 622 ntBASIC12.75□□□□□ -0.37
Pde6dO55057 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Pde6dO55057 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.75□□□□□ -0.37
Pde6dO55057 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pde6dO55057 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pde6dO55057 Wnt10b-204ENSMUST00000226655 1807 ntBASIC12.75□□□□□ -0.37
Pde6dO55057 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pde6dO55057 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pde6dO55057 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Pde6dO55057 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pde6dO55057 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pde6dO55057 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC12.75□□□□□ -0.37
Pde6dO55057 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC12.75□□□□□ -0.37
Pde6dO55057 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pde6dO55057 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.75□□□□□ -0.37
Pde6dO55057 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pde6dO55057 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.75□□□□□ -0.37
Pde6dO55057 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Pde6dO55057 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Pde6dO55057 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pde6dO55057 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pde6dO55057 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pde6dO55057 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pde6dO55057 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Pde6dO55057 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pde6dO55057 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pde6dO55057 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Pde6dO55057 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms