Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prom1O54990 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prom1O54990 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prom1O54990 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Prom1O54990 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prom1O54990 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prom1O54990 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Prom1O54990 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prom1O54990 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.74■□□□□ 0.43
Prom1O54990 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Prom1O54990 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Prom1O54990 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.74■□□□□ 0.43
Prom1O54990 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Prom1O54990 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.74■□□□□ 0.43
Prom1O54990 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.74■□□□□ 0.43
Prom1O54990 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.74■□□□□ 0.43
Prom1O54990 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.74■□□□□ 0.43
Prom1O54990 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.74■□□□□ 0.43
Prom1O54990 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.74■□□□□ 0.43
Prom1O54990 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.74■□□□□ 0.43
Prom1O54990 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prom1O54990 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.74■□□□□ 0.43
Prom1O54990 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.74■□□□□ 0.43
Prom1O54990 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.74■□□□□ 0.43
Prom1O54990 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.74■□□□□ 0.43
Prom1O54990 Gm8825-201ENSMUST00000182565 998 ntBASIC17.74■□□□□ 0.43
Prom1O54990 Gm4518-201ENSMUST00000182638 718 ntBASIC17.74■□□□□ 0.43
Prom1O54990 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.74■□□□□ 0.43
Prom1O54990 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.74■□□□□ 0.43
Prom1O54990 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.74■□□□□ 0.43
Prom1O54990 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.74■□□□□ 0.43
Prom1O54990 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.74■□□□□ 0.43
Prom1O54990 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.74■□□□□ 0.43
Prom1O54990 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Prom1O54990 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prom1O54990 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prom1O54990 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prom1O54990 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prom1O54990 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prom1O54990 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Prom1O54990 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Prom1O54990 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.73■□□□□ 0.43
Prom1O54990 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prom1O54990 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Prom1O54990 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prom1O54990 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.73■□□□□ 0.43
Prom1O54990 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Prom1O54990 Gm24513-201ENSMUST00000174964 138 ntBASIC17.73■□□□□ 0.43
Prom1O54990 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Prom1O54990 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.73■□□□□ 0.43
Prom1O54990 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prom1O54990 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prom1O54990 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prom1O54990 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prom1O54990 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prom1O54990 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prom1O54990 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prom1O54990 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prom1O54990 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prom1O54990 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prom1O54990 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.73■□□□□ 0.43
Prom1O54990 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Prom1O54990 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prom1O54990 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Prom1O54990 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Prom1O54990 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prom1O54990 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prom1O54990 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Prom1O54990 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prom1O54990 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.72■□□□□ 0.43
Prom1O54990 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.72■□□□□ 0.43
Prom1O54990 Gm27397-201ENSMUST00000184997 107 ntBASIC17.72■□□□□ 0.43
Prom1O54990 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prom1O54990 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prom1O54990 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Prom1O54990 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prom1O54990 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
Prom1O54990 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prom1O54990 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.72■□□□□ 0.43
Prom1O54990 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prom1O54990 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Prom1O54990 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Prom1O54990 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prom1O54990 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prom1O54990 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prom1O54990 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Prom1O54990 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prom1O54990 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prom1O54990 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prom1O54990 H2af-ps-201ENSMUST00000119066 295 ntBASIC17.71■□□□□ 0.43
Prom1O54990 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC17.71■□□□□ 0.43
Prom1O54990 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Prom1O54990 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Prom1O54990 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.71■□□□□ 0.43
Prom1O54990 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.71■□□□□ 0.43
Prom1O54990 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Prom1O54990 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prom1O54990 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prom1O54990 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prom1O54990 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms