Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cx3cl1O35188 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cx3cl1O35188 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cx3cl1O35188 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cx3cl1O35188 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cx3cl1O35188 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cx3cl1O35188 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cx3cl1O35188 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cx3cl1O35188 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Cx3cl1O35188 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cx3cl1O35188 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.15■□□□□ 0.02
Cx3cl1O35188 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cx3cl1O35188 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cx3cl1O35188 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Cx3cl1O35188 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cx3cl1O35188 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cx3cl1O35188 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cx3cl1O35188 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Cx3cl1O35188 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Cx3cl1O35188 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Cx3cl1O35188 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cx3cl1O35188 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cx3cl1O35188 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.15■□□□□ 0.02
Cx3cl1O35188 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cx3cl1O35188 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.15■□□□□ 0.02
Cx3cl1O35188 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Cx3cl1O35188 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cx3cl1O35188 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cx3cl1O35188 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cx3cl1O35188 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cx3cl1O35188 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cx3cl1O35188 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cx3cl1O35188 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Cx3cl1O35188 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Cx3cl1O35188 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cx3cl1O35188 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cx3cl1O35188 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.14■□□□□ 0.01
Cx3cl1O35188 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cx3cl1O35188 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cx3cl1O35188 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.14■□□□□ 0.01
Cx3cl1O35188 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cx3cl1O35188 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cx3cl1O35188 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cx3cl1O35188 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.14■□□□□ 0.01
Cx3cl1O35188 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Cx3cl1O35188 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cx3cl1O35188 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cx3cl1O35188 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cx3cl1O35188 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cx3cl1O35188 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cx3cl1O35188 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Cx3cl1O35188 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cx3cl1O35188 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cx3cl1O35188 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cx3cl1O35188 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cx3cl1O35188 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cx3cl1O35188 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cx3cl1O35188 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cx3cl1O35188 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cx3cl1O35188 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cx3cl1O35188 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cx3cl1O35188 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cx3cl1O35188 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Cx3cl1O35188 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cx3cl1O35188 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cx3cl1O35188 Mir3081-201ENSMUST00000175305 84 ntBASIC15.13■□□□□ 0.01
Cx3cl1O35188 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cx3cl1O35188 Gm27357-201ENSMUST00000183754 135 ntBASIC15.13■□□□□ 0.01
Cx3cl1O35188 Gm17807-201ENSMUST00000186869 298 ntBASIC15.13■□□□□ 0.01
Cx3cl1O35188 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cx3cl1O35188 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cx3cl1O35188 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.13■□□□□ 0.01
Cx3cl1O35188 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.13■□□□□ 0.01
Cx3cl1O35188 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cx3cl1O35188 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.13■□□□□ 0.01
Cx3cl1O35188 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cx3cl1O35188 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cx3cl1O35188 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cx3cl1O35188 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Cx3cl1O35188 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cx3cl1O35188 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cx3cl1O35188 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cx3cl1O35188 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cx3cl1O35188 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cx3cl1O35188 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cx3cl1O35188 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Cx3cl1O35188 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cx3cl1O35188 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cx3cl1O35188 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cx3cl1O35188 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cx3cl1O35188 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cx3cl1O35188 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cx3cl1O35188 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Cx3cl1O35188 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cx3cl1O35188 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cx3cl1O35188 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cx3cl1O35188 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cx3cl1O35188 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cx3cl1O35188 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Cx3cl1O35188 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms