Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.93□□□□□ -0.18
Gfra3O35118 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gfra3O35118 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gfra3O35118 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.93□□□□□ -0.18
Gfra3O35118 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gfra3O35118 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gfra3O35118 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gfra3O35118 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Gfra3O35118 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Gfra3O35118 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Gfra3O35118 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Gfra3O35118 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Gfra3O35118 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Gfra3O35118 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Gfra3O35118 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Gfra3O35118 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Gfra3O35118 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Gfra3O35118 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Gfra3O35118 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Gfra3O35118 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Gfra3O35118 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Gfra3O35118 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC13.92□□□□□ -0.18
Gfra3O35118 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Gfra3O35118 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.92□□□□□ -0.18
Gfra3O35118 Gm27459-201ENSMUST00000184860 107 ntBASIC13.92□□□□□ -0.18
Gfra3O35118 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.92□□□□□ -0.18
Gfra3O35118 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.92□□□□□ -0.18
Gfra3O35118 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Gfra3O35118 Gm7461-201ENSMUST00000058918 827 ntBASIC13.92□□□□□ -0.18
Gfra3O35118 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Gfra3O35118 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Gfra3O35118 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Gfra3O35118 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Gfra3O35118 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Gfra3O35118 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.91□□□□□ -0.18
Gfra3O35118 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gfra3O35118 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Gfra3O35118 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gfra3O35118 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gfra3O35118 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Gfra3O35118 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gfra3O35118 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Gfra3O35118 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gfra3O35118 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gfra3O35118 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Gfra3O35118 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gfra3O35118 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gfra3O35118 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.91□□□□□ -0.18
Gfra3O35118 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gfra3O35118 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gfra3O35118 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC13.91□□□□□ -0.18
Gfra3O35118 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.91□□□□□ -0.18
Gfra3O35118 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC13.91□□□□□ -0.18
Gfra3O35118 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gfra3O35118 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gfra3O35118 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gfra3O35118 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gfra3O35118 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gfra3O35118 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gfra3O35118 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.91□□□□□ -0.18
Gfra3O35118 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gfra3O35118 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gfra3O35118 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Gfra3O35118 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Gfra3O35118 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Gfra3O35118 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gfra3O35118 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gfra3O35118 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Gfra3O35118 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Gfra3O35118 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Gfra3O35118 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Gfra3O35118 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Gfra3O35118 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Gfra3O35118 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Gfra3O35118 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Gfra3O35118 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.9□□□□□ -0.18
Gfra3O35118 Gm13216-201ENSMUST00000117145 591 ntBASIC13.9□□□□□ -0.18
Gfra3O35118 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC13.9□□□□□ -0.18
Gfra3O35118 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.9□□□□□ -0.18
Gfra3O35118 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Gfra3O35118 Gm43930-201ENSMUST00000203868 845 ntBASIC13.9□□□□□ -0.18
Gfra3O35118 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.9□□□□□ -0.18
Gfra3O35118 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Gfra3O35118 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Gfra3O35118 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Gfra3O35118 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Gfra3O35118 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Gfra3O35118 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC13.9□□□□□ -0.18
Gfra3O35118 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC13.9□□□□□ -0.18
Gfra3O35118 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.19
Gfra3O35118 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Gfra3O35118 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gfra3O35118 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gfra3O35118 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gfra3O35118 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gfra3O35118 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gfra3O35118 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.89□□□□□ -0.19
Gfra3O35118 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gfra3O35118 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gfra3O35118 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 95.6 ms