Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trove2O08848 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trove2O08848 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trove2O08848 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trove2O08848 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trove2O08848 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trove2O08848 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trove2O08848 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Trove2O08848 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trove2O08848 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trove2O08848 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trove2O08848 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC16.58■□□□□ 0.24
Trove2O08848 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trove2O08848 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trove2O08848 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trove2O08848 Gm17661-201ENSMUST00000170317 270 ntBASIC16.58■□□□□ 0.24
Trove2O08848 Gm38027-201ENSMUST00000192315 235 ntBASIC16.58■□□□□ 0.24
Trove2O08848 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trove2O08848 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trove2O08848 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trove2O08848 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trove2O08848 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trove2O08848 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trove2O08848 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.58■□□□□ 0.24
Trove2O08848 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trove2O08848 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trove2O08848 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trove2O08848 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trove2O08848 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trove2O08848 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trove2O08848 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trove2O08848 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trove2O08848 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trove2O08848 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trove2O08848 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trove2O08848 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trove2O08848 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trove2O08848 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trove2O08848 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.57■□□□□ 0.24
Trove2O08848 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.57■□□□□ 0.24
Trove2O08848 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trove2O08848 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Trove2O08848 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Trove2O08848 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Trove2O08848 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.57■□□□□ 0.24
Trove2O08848 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trove2O08848 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.57■□□□□ 0.24
Trove2O08848 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trove2O08848 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trove2O08848 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trove2O08848 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trove2O08848 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trove2O08848 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trove2O08848 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trove2O08848 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trove2O08848 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trove2O08848 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trove2O08848 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Trove2O08848 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trove2O08848 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.56■□□□□ 0.24
Trove2O08848 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trove2O08848 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.56■□□□□ 0.24
Trove2O08848 Gm9731-201ENSMUST00000209480 747 ntBASIC16.56■□□□□ 0.24
Trove2O08848 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trove2O08848 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trove2O08848 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trove2O08848 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trove2O08848 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trove2O08848 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trove2O08848 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trove2O08848 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trove2O08848 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trove2O08848 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trove2O08848 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trove2O08848 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.55■□□□□ 0.24
Trove2O08848 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.55■□□□□ 0.24
Trove2O08848 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
Trove2O08848 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trove2O08848 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trove2O08848 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trove2O08848 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trove2O08848 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trove2O08848 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trove2O08848 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trove2O08848 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trove2O08848 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trove2O08848 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trove2O08848 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trove2O08848 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trove2O08848 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trove2O08848 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trove2O08848 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trove2O08848 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trove2O08848 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trove2O08848 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trove2O08848 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trove2O08848 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Trove2O08848 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trove2O08848 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trove2O08848 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms