Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Shisa8J3QNX5 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.76□□□□□ -0.05
Shisa8J3QNX5 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Shisa8J3QNX5 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shisa8J3QNX5 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shisa8J3QNX5 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Shisa8J3QNX5 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Shisa8J3QNX5 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shisa8J3QNX5 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shisa8J3QNX5 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shisa8J3QNX5 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shisa8J3QNX5 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Shisa8J3QNX5 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Shisa8J3QNX5 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Shisa8J3QNX5 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shisa8J3QNX5 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shisa8J3QNX5 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Shisa8J3QNX5 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shisa8J3QNX5 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.75□□□□□ -0.05
Shisa8J3QNX5 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Shisa8J3QNX5 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shisa8J3QNX5 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC14.75□□□□□ -0.05
Shisa8J3QNX5 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.75□□□□□ -0.05
Shisa8J3QNX5 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shisa8J3QNX5 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shisa8J3QNX5 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shisa8J3QNX5 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shisa8J3QNX5 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Shisa8J3QNX5 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Shisa8J3QNX5 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shisa8J3QNX5 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shisa8J3QNX5 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Shisa8J3QNX5 Actl10-202ENSMUST00000226583 1501 ntBASIC14.75□□□□□ -0.05
Shisa8J3QNX5 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shisa8J3QNX5 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shisa8J3QNX5 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shisa8J3QNX5 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shisa8J3QNX5 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shisa8J3QNX5 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Shisa8J3QNX5 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Shisa8J3QNX5 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shisa8J3QNX5 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shisa8J3QNX5 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shisa8J3QNX5 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
Shisa8J3QNX5 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shisa8J3QNX5 Sybu-209ENSMUST00000228639 4113 ntBASIC14.74□□□□□ -0.05
Shisa8J3QNX5 Gm12527-201ENSMUST00000117967 564 ntBASIC14.74□□□□□ -0.05
Shisa8J3QNX5 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shisa8J3QNX5 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC14.74□□□□□ -0.05
Shisa8J3QNX5 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shisa8J3QNX5 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shisa8J3QNX5 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shisa8J3QNX5 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Shisa8J3QNX5 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shisa8J3QNX5 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.74□□□□□ -0.05
Shisa8J3QNX5 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
Shisa8J3QNX5 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shisa8J3QNX5 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Shisa8J3QNX5 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shisa8J3QNX5 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shisa8J3QNX5 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shisa8J3QNX5 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Shisa8J3QNX5 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shisa8J3QNX5 Asic1-205ENSMUST00000228185 1818 ntBASIC14.73□□□□□ -0.05
Shisa8J3QNX5 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shisa8J3QNX5 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shisa8J3QNX5 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Shisa8J3QNX5 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shisa8J3QNX5 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Shisa8J3QNX5 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shisa8J3QNX5 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shisa8J3QNX5 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shisa8J3QNX5 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shisa8J3QNX5 Gm5643-201ENSMUST00000117081 966 ntBASIC14.73□□□□□ -0.05
Shisa8J3QNX5 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shisa8J3QNX5 Gm44878-201ENSMUST00000205812 1295 ntBASIC14.73□□□□□ -0.05
Shisa8J3QNX5 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shisa8J3QNX5 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Shisa8J3QNX5 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shisa8J3QNX5 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shisa8J3QNX5 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shisa8J3QNX5 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shisa8J3QNX5 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Shisa8J3QNX5 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.73□□□□□ -0.05
Shisa8J3QNX5 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shisa8J3QNX5 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shisa8J3QNX5 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shisa8J3QNX5 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shisa8J3QNX5 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shisa8J3QNX5 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shisa8J3QNX5 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shisa8J3QNX5 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Shisa8J3QNX5 Phf7-203ENSMUST00000226565 1971 ntBASIC14.73□□□□□ -0.05
Shisa8J3QNX5 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Shisa8J3QNX5 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shisa8J3QNX5 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Shisa8J3QNX5 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shisa8J3QNX5 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Shisa8J3QNX5 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shisa8J3QNX5 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms