Protein–RNA interactions for Protein: J3QNG1

Gm6408, Predicted gene 6408, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm6408J3QNG1 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.13■□□□□ 0.17
Gm6408J3QNG1 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm6408J3QNG1 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm6408J3QNG1 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm6408J3QNG1 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.13■□□□□ 0.17
Gm6408J3QNG1 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm6408J3QNG1 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm6408J3QNG1 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm6408J3QNG1 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
Gm6408J3QNG1 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.13■□□□□ 0.17
Gm6408J3QNG1 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm6408J3QNG1 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm6408J3QNG1 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm6408J3QNG1 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm6408J3QNG1 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm6408J3QNG1 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm6408J3QNG1 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm6408J3QNG1 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm6408J3QNG1 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm6408J3QNG1 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm6408J3QNG1 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.12■□□□□ 0.17
Gm6408J3QNG1 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm6408J3QNG1 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm6408J3QNG1 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
Gm6408J3QNG1 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Gm6408J3QNG1 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Gm6408J3QNG1 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm6408J3QNG1 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Gm6408J3QNG1 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.12■□□□□ 0.17
Gm6408J3QNG1 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm6408J3QNG1 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm6408J3QNG1 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Gm6408J3QNG1 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm6408J3QNG1 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Gm6408J3QNG1 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm6408J3QNG1 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm6408J3QNG1 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm6408J3QNG1 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm6408J3QNG1 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm6408J3QNG1 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm6408J3QNG1 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm6408J3QNG1 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm6408J3QNG1 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm6408J3QNG1 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm6408J3QNG1 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.11■□□□□ 0.17
Gm6408J3QNG1 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm6408J3QNG1 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm6408J3QNG1 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm6408J3QNG1 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gm6408J3QNG1 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm6408J3QNG1 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.11■□□□□ 0.17
Gm6408J3QNG1 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Gm6408J3QNG1 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.11■□□□□ 0.17
Gm6408J3QNG1 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm6408J3QNG1 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.11■□□□□ 0.17
Gm6408J3QNG1 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm6408J3QNG1 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Gm6408J3QNG1 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm6408J3QNG1 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm6408J3QNG1 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gm6408J3QNG1 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.11■□□□□ 0.17
Gm6408J3QNG1 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Gm6408J3QNG1 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm6408J3QNG1 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm6408J3QNG1 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm6408J3QNG1 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm6408J3QNG1 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm6408J3QNG1 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm6408J3QNG1 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
Gm6408J3QNG1 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm6408J3QNG1 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.1■□□□□ 0.17
Gm6408J3QNG1 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.1■□□□□ 0.17
Gm6408J3QNG1 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.1■□□□□ 0.17
Gm6408J3QNG1 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm6408J3QNG1 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm6408J3QNG1 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm6408J3QNG1 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm6408J3QNG1 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Gm6408J3QNG1 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm6408J3QNG1 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm6408J3QNG1 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Gm6408J3QNG1 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Gm6408J3QNG1 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm6408J3QNG1 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.09■□□□□ 0.17
Gm6408J3QNG1 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Gm6408J3QNG1 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
Gm6408J3QNG1 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm6408J3QNG1 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm6408J3QNG1 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.09■□□□□ 0.17
Gm6408J3QNG1 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Gm6408J3QNG1 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Gm6408J3QNG1 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.09■□□□□ 0.17
Gm6408J3QNG1 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.09■□□□□ 0.17
Gm6408J3QNG1 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm6408J3QNG1 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Gm6408J3QNG1 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.09■□□□□ 0.17
Gm6408J3QNG1 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm6408J3QNG1 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm6408J3QNG1 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm6408J3QNG1 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms