Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Pcdh1F7BJK1 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh1F7BJK1 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh1F7BJK1 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh1F7BJK1 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh1F7BJK1 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh1F7BJK1 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh1F7BJK1 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Pcdh1F7BJK1 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh1F7BJK1 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Pcdh1F7BJK1 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh1F7BJK1 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh1F7BJK1 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
Pcdh1F7BJK1 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh1F7BJK1 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh1F7BJK1 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh1F7BJK1 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh1F7BJK1 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh1F7BJK1 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.54□□□□□ -0.08
Pcdh1F7BJK1 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh1F7BJK1 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.54□□□□□ -0.08
Pcdh1F7BJK1 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh1F7BJK1 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.54□□□□□ -0.08
Pcdh1F7BJK1 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh1F7BJK1 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh1F7BJK1 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh1F7BJK1 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh1F7BJK1 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh1F7BJK1 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.54□□□□□ -0.08
Pcdh1F7BJK1 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh1F7BJK1 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh1F7BJK1 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh1F7BJK1 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh1F7BJK1 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.54□□□□□ -0.08
Pcdh1F7BJK1 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Pcdh1F7BJK1 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh1F7BJK1 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh1F7BJK1 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh1F7BJK1 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.53□□□□□ -0.08
Pcdh1F7BJK1 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Pcdh1F7BJK1 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh1F7BJK1 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh1F7BJK1 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh1F7BJK1 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh1F7BJK1 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh1F7BJK1 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh1F7BJK1 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh1F7BJK1 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Pcdh1F7BJK1 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh1F7BJK1 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh1F7BJK1 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh1F7BJK1 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh1F7BJK1 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.53□□□□□ -0.08
Pcdh1F7BJK1 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh1F7BJK1 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh1F7BJK1 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.53□□□□□ -0.08
Pcdh1F7BJK1 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh1F7BJK1 Gm3375-201ENSMUST00000203929 796 ntBASIC14.53□□□□□ -0.08
Pcdh1F7BJK1 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh1F7BJK1 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.53□□□□□ -0.08
Pcdh1F7BJK1 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh1F7BJK1 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh1F7BJK1 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh1F7BJK1 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Pcdh1F7BJK1 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Pcdh1F7BJK1 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh1F7BJK1 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh1F7BJK1 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh1F7BJK1 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.53□□□□□ -0.08
Pcdh1F7BJK1 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh1F7BJK1 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh1F7BJK1 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh1F7BJK1 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh1F7BJK1 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.52□□□□□ -0.08
Pcdh1F7BJK1 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh1F7BJK1 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.52□□□□□ -0.08
Pcdh1F7BJK1 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh1F7BJK1 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh1F7BJK1 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh1F7BJK1 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh1F7BJK1 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Pcdh1F7BJK1 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh1F7BJK1 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.52□□□□□ -0.09
Pcdh1F7BJK1 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh1F7BJK1 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh1F7BJK1 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh1F7BJK1 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh1F7BJK1 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh1F7BJK1 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Pcdh1F7BJK1 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh1F7BJK1 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.52□□□□□ -0.09
Pcdh1F7BJK1 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Pcdh1F7BJK1 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh1F7BJK1 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh1F7BJK1 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh1F7BJK1 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh1F7BJK1 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh1F7BJK1 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh1F7BJK1 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh1F7BJK1 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms