Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4lE9Q2N0 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4lE9Q2N0 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Cpsf4lE9Q2N0 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4lE9Q2N0 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4lE9Q2N0 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4lE9Q2N0 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4lE9Q2N0 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4lE9Q2N0 Gm13312-201ENSMUST00000119631 718 ntBASIC13.66□□□□□ -0.22
Cpsf4lE9Q2N0 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4lE9Q2N0 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4lE9Q2N0 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC13.66□□□□□ -0.22
Cpsf4lE9Q2N0 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.66□□□□□ -0.22
Cpsf4lE9Q2N0 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4lE9Q2N0 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC13.66□□□□□ -0.22
Cpsf4lE9Q2N0 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4lE9Q2N0 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4lE9Q2N0 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Cpsf4lE9Q2N0 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4lE9Q2N0 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4lE9Q2N0 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cpsf4lE9Q2N0 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4lE9Q2N0 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4lE9Q2N0 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4lE9Q2N0 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4lE9Q2N0 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4lE9Q2N0 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4lE9Q2N0 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cpsf4lE9Q2N0 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cpsf4lE9Q2N0 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cpsf4lE9Q2N0 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cpsf4lE9Q2N0 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.65□□□□□ -0.22
Cpsf4lE9Q2N0 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cpsf4lE9Q2N0 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.65□□□□□ -0.22
Cpsf4lE9Q2N0 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cpsf4lE9Q2N0 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cpsf4lE9Q2N0 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cpsf4lE9Q2N0 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC13.65□□□□□ -0.22
Cpsf4lE9Q2N0 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cpsf4lE9Q2N0 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cpsf4lE9Q2N0 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cpsf4lE9Q2N0 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cpsf4lE9Q2N0 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC13.65□□□□□ -0.22
Cpsf4lE9Q2N0 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Cpsf4lE9Q2N0 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC13.65□□□□□ -0.22
Cpsf4lE9Q2N0 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC13.65□□□□□ -0.22
Cpsf4lE9Q2N0 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cpsf4lE9Q2N0 AC130671.1-201ENSMUST00000227384 1237 ntBASIC13.65□□□□□ -0.22
Cpsf4lE9Q2N0 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cpsf4lE9Q2N0 Gm7367-201ENSMUST00000057611 492 ntBASIC13.65□□□□□ -0.22
Cpsf4lE9Q2N0 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cpsf4lE9Q2N0 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cpsf4lE9Q2N0 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cpsf4lE9Q2N0 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cpsf4lE9Q2N0 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cpsf4lE9Q2N0 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Cpsf4lE9Q2N0 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Cpsf4lE9Q2N0 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
Cpsf4lE9Q2N0 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.64□□□□□ -0.23
Cpsf4lE9Q2N0 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpsf4lE9Q2N0 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpsf4lE9Q2N0 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpsf4lE9Q2N0 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cpsf4lE9Q2N0 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpsf4lE9Q2N0 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpsf4lE9Q2N0 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpsf4lE9Q2N0 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpsf4lE9Q2N0 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Cpsf4lE9Q2N0 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Cpsf4lE9Q2N0 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpsf4lE9Q2N0 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpsf4lE9Q2N0 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Cpsf4lE9Q2N0 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpsf4lE9Q2N0 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Cpsf4lE9Q2N0 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpsf4lE9Q2N0 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpsf4lE9Q2N0 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Cpsf4lE9Q2N0 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Cpsf4lE9Q2N0 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cpsf4lE9Q2N0 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.64□□□□□ -0.23
Cpsf4lE9Q2N0 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC13.64□□□□□ -0.23
Cpsf4lE9Q2N0 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Cpsf4lE9Q2N0 Mir3081-201ENSMUST00000175305 84 ntBASIC13.64□□□□□ -0.23
Cpsf4lE9Q2N0 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cpsf4lE9Q2N0 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.64□□□□□ -0.23
Cpsf4lE9Q2N0 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpsf4lE9Q2N0 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpsf4lE9Q2N0 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC13.64□□□□□ -0.23
Cpsf4lE9Q2N0 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpsf4lE9Q2N0 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cpsf4lE9Q2N0 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf4lE9Q2N0 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf4lE9Q2N0 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf4lE9Q2N0 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf4lE9Q2N0 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cpsf4lE9Q2N0 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf4lE9Q2N0 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf4lE9Q2N0 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf4lE9Q2N0 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf4lE9Q2N0 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms