Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Dchs1E9PVD3 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Dchs1E9PVD3 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Dchs1E9PVD3 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Dchs1E9PVD3 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Dchs1E9PVD3 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Dchs1E9PVD3 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Dchs1E9PVD3 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Dchs1E9PVD3 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Dchs1E9PVD3 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Dchs1E9PVD3 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Dchs1E9PVD3 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.19□□□□□ -0.14
Dchs1E9PVD3 Gm44335-201ENSMUST00000196879 141 ntBASIC14.19□□□□□ -0.14
Dchs1E9PVD3 Gm44297-201ENSMUST00000198304 141 ntBASIC14.19□□□□□ -0.14
Dchs1E9PVD3 Gm44346-201ENSMUST00000198851 141 ntBASIC14.19□□□□□ -0.14
Dchs1E9PVD3 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Dchs1E9PVD3 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Dchs1E9PVD3 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Dchs1E9PVD3 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Dchs1E9PVD3 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Dchs1E9PVD3 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.19□□□□□ -0.14
Dchs1E9PVD3 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Dchs1E9PVD3 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Dchs1E9PVD3 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Dchs1E9PVD3 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Dchs1E9PVD3 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Dchs1E9PVD3 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Dchs1E9PVD3 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Dchs1E9PVD3 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Dchs1E9PVD3 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Dchs1E9PVD3 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Dchs1E9PVD3 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.19□□□□□ -0.14
Dchs1E9PVD3 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.19□□□□□ -0.14
Dchs1E9PVD3 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Dchs1E9PVD3 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.19□□□□□ -0.14
Dchs1E9PVD3 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.19□□□□□ -0.14
Dchs1E9PVD3 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Dchs1E9PVD3 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Dchs1E9PVD3 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dchs1E9PVD3 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dchs1E9PVD3 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dchs1E9PVD3 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dchs1E9PVD3 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Dchs1E9PVD3 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Dchs1E9PVD3 Gm4899-201ENSMUST00000178708 719 ntBASIC14.18□□□□□ -0.14
Dchs1E9PVD3 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Dchs1E9PVD3 Gm44492-201ENSMUST00000197012 141 ntBASIC14.18□□□□□ -0.14
Dchs1E9PVD3 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Dchs1E9PVD3 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Dchs1E9PVD3 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dchs1E9PVD3 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dchs1E9PVD3 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Dchs1E9PVD3 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.18□□□□□ -0.14
Dchs1E9PVD3 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dchs1E9PVD3 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Dchs1E9PVD3 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dchs1E9PVD3 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Dchs1E9PVD3 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dchs1E9PVD3 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Dchs1E9PVD3 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dchs1E9PVD3 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Dchs1E9PVD3 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dchs1E9PVD3 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.17□□□□□ -0.14
Dchs1E9PVD3 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dchs1E9PVD3 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dchs1E9PVD3 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.17□□□□□ -0.14
Dchs1E9PVD3 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.17□□□□□ -0.14
Dchs1E9PVD3 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.17□□□□□ -0.14
Dchs1E9PVD3 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dchs1E9PVD3 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dchs1E9PVD3 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dchs1E9PVD3 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.17□□□□□ -0.14
Dchs1E9PVD3 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dchs1E9PVD3 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dchs1E9PVD3 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dchs1E9PVD3 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.17□□□□□ -0.14
Dchs1E9PVD3 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Dchs1E9PVD3 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dchs1E9PVD3 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.17□□□□□ -0.14
Dchs1E9PVD3 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Dchs1E9PVD3 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dchs1E9PVD3 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dchs1E9PVD3 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dchs1E9PVD3 Gm7222-201ENSMUST00000117512 906 ntBASIC14.17□□□□□ -0.14
Dchs1E9PVD3 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dchs1E9PVD3 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dchs1E9PVD3 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Dchs1E9PVD3 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dchs1E9PVD3 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Dchs1E9PVD3 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.16□□□□□ -0.14
Dchs1E9PVD3 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.16□□□□□ -0.14
Dchs1E9PVD3 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dchs1E9PVD3 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dchs1E9PVD3 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Dchs1E9PVD3 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.16□□□□□ -0.14
Dchs1E9PVD3 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Dchs1E9PVD3 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dchs1E9PVD3 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.16□□□□□ -0.14
Dchs1E9PVD3 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dchs1E9PVD3 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms