Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm28043E0CXC2 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm28043E0CXC2 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.21■□□□□ 0.19
Gm28043E0CXC2 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm28043E0CXC2 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.21■□□□□ 0.19
Gm28043E0CXC2 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm28043E0CXC2 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.21■□□□□ 0.19
Gm28043E0CXC2 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Gm28043E0CXC2 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.21■□□□□ 0.19
Gm28043E0CXC2 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm28043E0CXC2 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm28043E0CXC2 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm28043E0CXC2 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Gm28043E0CXC2 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm28043E0CXC2 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm28043E0CXC2 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm28043E0CXC2 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm28043E0CXC2 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Gm28043E0CXC2 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Gm28043E0CXC2 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Gm28043E0CXC2 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.18
Gm28043E0CXC2 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Gm28043E0CXC2 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Gm28043E0CXC2 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm28043E0CXC2 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm28043E0CXC2 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm28043E0CXC2 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Gm28043E0CXC2 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Gm28043E0CXC2 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm28043E0CXC2 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm28043E0CXC2 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm28043E0CXC2 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm28043E0CXC2 Gm16061-201ENSMUST00000122167 857 ntBASIC16.2■□□□□ 0.18
Gm28043E0CXC2 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Gm28043E0CXC2 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.2■□□□□ 0.18
Gm28043E0CXC2 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Gm28043E0CXC2 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.2■□□□□ 0.18
Gm28043E0CXC2 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm28043E0CXC2 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.2■□□□□ 0.18
Gm28043E0CXC2 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Gm28043E0CXC2 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.2■□□□□ 0.18
Gm28043E0CXC2 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm28043E0CXC2 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm28043E0CXC2 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Gm28043E0CXC2 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.2■□□□□ 0.18
Gm28043E0CXC2 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm28043E0CXC2 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.2■□□□□ 0.18
Gm28043E0CXC2 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Gm28043E0CXC2 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Gm28043E0CXC2 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm28043E0CXC2 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm28043E0CXC2 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm28043E0CXC2 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm28043E0CXC2 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm28043E0CXC2 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Gm28043E0CXC2 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Gm28043E0CXC2 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Gm28043E0CXC2 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.19■□□□□ 0.18
Gm28043E0CXC2 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm28043E0CXC2 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Gm28043E0CXC2 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Gm28043E0CXC2 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm28043E0CXC2 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm28043E0CXC2 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm28043E0CXC2 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm28043E0CXC2 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Gm28043E0CXC2 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm28043E0CXC2 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Gm28043E0CXC2 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm28043E0CXC2 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Gm28043E0CXC2 Gm6433-201ENSMUST00000118634 875 ntBASIC16.19■□□□□ 0.18
Gm28043E0CXC2 Gm13474-201ENSMUST00000122466 815 ntBASIC16.19■□□□□ 0.18
Gm28043E0CXC2 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Gm28043E0CXC2 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Gm28043E0CXC2 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Gm28043E0CXC2 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm28043E0CXC2 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.19■□□□□ 0.18
Gm28043E0CXC2 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm28043E0CXC2 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Gm28043E0CXC2 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm28043E0CXC2 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Gm28043E0CXC2 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm28043E0CXC2 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.19■□□□□ 0.18
Gm28043E0CXC2 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm28043E0CXC2 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.19■□□□□ 0.18
Gm28043E0CXC2 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm28043E0CXC2 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm28043E0CXC2 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Gm28043E0CXC2 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm28043E0CXC2 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm28043E0CXC2 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.18■□□□□ 0.18
Gm28043E0CXC2 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm28043E0CXC2 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Gm28043E0CXC2 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Gm28043E0CXC2 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm28043E0CXC2 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.18■□□□□ 0.18
Gm28043E0CXC2 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm28043E0CXC2 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Gm28043E0CXC2 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm28043E0CXC2 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms