Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Syce3B5KM66 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Syce3B5KM66 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Syce3B5KM66 Il3ra-202ENSMUST00000223589 738 ntBASIC18.53■□□□□ 0.56
Syce3B5KM66 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.53■□□□□ 0.56
Syce3B5KM66 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Syce3B5KM66 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Syce3B5KM66 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Syce3B5KM66 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.53■□□□□ 0.56
Syce3B5KM66 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC18.53■□□□□ 0.56
Syce3B5KM66 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Syce3B5KM66 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Syce3B5KM66 Actl10-202ENSMUST00000226583 1501 ntBASIC18.53■□□□□ 0.56
Syce3B5KM66 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.53■□□□□ 0.56
Syce3B5KM66 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC18.53■□□□□ 0.56
Syce3B5KM66 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Syce3B5KM66 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Syce3B5KM66 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Syce3B5KM66 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Syce3B5KM66 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Syce3B5KM66 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Syce3B5KM66 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Syce3B5KM66 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Syce3B5KM66 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Syce3B5KM66 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.52■□□□□ 0.56
Syce3B5KM66 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.52■□□□□ 0.56
Syce3B5KM66 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Syce3B5KM66 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Syce3B5KM66 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Syce3B5KM66 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Syce3B5KM66 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Syce3B5KM66 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Syce3B5KM66 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Syce3B5KM66 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Syce3B5KM66 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Syce3B5KM66 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Syce3B5KM66 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.55
Syce3B5KM66 Gm43598-201ENSMUST00000202482 2479 ntBASIC18.51■□□□□ 0.55
Syce3B5KM66 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Syce3B5KM66 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.51■□□□□ 0.55
Syce3B5KM66 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Syce3B5KM66 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Syce3B5KM66 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Syce3B5KM66 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Syce3B5KM66 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Syce3B5KM66 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.51■□□□□ 0.55
Syce3B5KM66 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Syce3B5KM66 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Syce3B5KM66 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Syce3B5KM66 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Syce3B5KM66 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Syce3B5KM66 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Syce3B5KM66 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.51■□□□□ 0.55
Syce3B5KM66 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC18.51■□□□□ 0.55
Syce3B5KM66 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Syce3B5KM66 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Syce3B5KM66 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Syce3B5KM66 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Syce3B5KM66 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Syce3B5KM66 Gm27528-202ENSMUST00000222916 2012 ntBASIC18.5■□□□□ 0.55
Syce3B5KM66 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Syce3B5KM66 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Syce3B5KM66 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Syce3B5KM66 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Syce3B5KM66 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Syce3B5KM66 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Syce3B5KM66 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Syce3B5KM66 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Syce3B5KM66 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Syce3B5KM66 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Syce3B5KM66 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.5■□□□□ 0.55
Syce3B5KM66 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Syce3B5KM66 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Syce3B5KM66 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Syce3B5KM66 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Syce3B5KM66 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Syce3B5KM66 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Syce3B5KM66 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Syce3B5KM66 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Syce3B5KM66 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Syce3B5KM66 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Syce3B5KM66 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Syce3B5KM66 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Syce3B5KM66 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.49■□□□□ 0.55
Syce3B5KM66 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Syce3B5KM66 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC18.49■□□□□ 0.55
Syce3B5KM66 Sybu-209ENSMUST00000228639 4113 ntBASIC18.49■□□□□ 0.55
Syce3B5KM66 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Syce3B5KM66 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Syce3B5KM66 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Syce3B5KM66 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.49■□□□□ 0.55
Syce3B5KM66 Gm37179-201ENSMUST00000194862 823 ntBASIC18.49■□□□□ 0.55
Syce3B5KM66 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
Syce3B5KM66 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Syce3B5KM66 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC18.49■□□□□ 0.55
Syce3B5KM66 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Syce3B5KM66 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Syce3B5KM66 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC18.49■□□□□ 0.55
Syce3B5KM66 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Syce3B5KM66 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms