Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.74■□□□□ 0.11
Chd3B1AR17 Gm12350-201ENSMUST00000121208 462 ntBASIC15.74■□□□□ 0.11
Chd3B1AR17 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chd3B1AR17 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Chd3B1AR17 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.74■□□□□ 0.11
Chd3B1AR17 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chd3B1AR17 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chd3B1AR17 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chd3B1AR17 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chd3B1AR17 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chd3B1AR17 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Chd3B1AR17 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chd3B1AR17 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chd3B1AR17 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chd3B1AR17 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Chd3B1AR17 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chd3B1AR17 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chd3B1AR17 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chd3B1AR17 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chd3B1AR17 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chd3B1AR17 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Chd3B1AR17 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.74■□□□□ 0.11
Chd3B1AR17 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chd3B1AR17 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chd3B1AR17 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chd3B1AR17 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chd3B1AR17 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chd3B1AR17 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chd3B1AR17 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Chd3B1AR17 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Chd3B1AR17 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chd3B1AR17 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chd3B1AR17 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.73■□□□□ 0.11
Chd3B1AR17 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chd3B1AR17 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Chd3B1AR17 Gm4535-201ENSMUST00000182274 558 ntBASIC15.73■□□□□ 0.11
Chd3B1AR17 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Chd3B1AR17 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Chd3B1AR17 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chd3B1AR17 Gm10355-201ENSMUST00000097146 517 ntBASIC15.73■□□□□ 0.11
Chd3B1AR17 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.73■□□□□ 0.11
Chd3B1AR17 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chd3B1AR17 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chd3B1AR17 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chd3B1AR17 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chd3B1AR17 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Chd3B1AR17 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chd3B1AR17 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chd3B1AR17 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chd3B1AR17 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Chd3B1AR17 Mir5131-201ENSMUST00000175426 93 ntBASIC15.72■□□□□ 0.11
Chd3B1AR17 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chd3B1AR17 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chd3B1AR17 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Chd3B1AR17 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chd3B1AR17 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chd3B1AR17 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Chd3B1AR17 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Chd3B1AR17 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chd3B1AR17 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chd3B1AR17 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chd3B1AR17 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Chd3B1AR17 Gm25990-201ENSMUST00000102440 86 ntBASIC15.72■□□□□ 0.11
Chd3B1AR17 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Chd3B1AR17 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Chd3B1AR17 Gm6089-201ENSMUST00000197666 938 ntBASIC15.72■□□□□ 0.11
Chd3B1AR17 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Chd3B1AR17 Gm18206-201ENSMUST00000207027 926 ntBASIC15.72■□□□□ 0.11
Chd3B1AR17 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
Chd3B1AR17 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Chd3B1AR17 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chd3B1AR17 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Chd3B1AR17 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chd3B1AR17 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Chd3B1AR17 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chd3B1AR17 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.71■□□□□ 0.11
Chd3B1AR17 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Chd3B1AR17 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Chd3B1AR17 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chd3B1AR17 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.71■□□□□ 0.11
Chd3B1AR17 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.71■□□□□ 0.11
Chd3B1AR17 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.71■□□□□ 0.11
Chd3B1AR17 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chd3B1AR17 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Chd3B1AR17 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chd3B1AR17 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chd3B1AR17 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chd3B1AR17 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Chd3B1AR17 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.71■□□□□ 0.1
Chd3B1AR17 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.71■□□□□ 0.1
Chd3B1AR17 Gm6257-201ENSMUST00000163864 910 ntBASIC15.71■□□□□ 0.1
Chd3B1AR17 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.71■□□□□ 0.1
Chd3B1AR17 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.71■□□□□ 0.1
Chd3B1AR17 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
Chd3B1AR17 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.71■□□□□ 0.1
Chd3B1AR17 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Chd3B1AR17 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd3B1AR17 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chd3B1AR17 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd3B1AR17 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms