Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Mir7684-201ENSMUST00000183858 60 ntBASIC12.13□□□□□ -0.47
Col6a5A6H584 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a5A6H584 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Col6a5A6H584 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.13□□□□□ -0.47
Col6a5A6H584 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a5A6H584 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a5A6H584 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a5A6H584 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Col6a5A6H584 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a5A6H584 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a5A6H584 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a5A6H584 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a5A6H584 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Col6a5A6H584 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a5A6H584 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC12.13□□□□□ -0.47
Col6a5A6H584 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a5A6H584 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a5A6H584 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a5A6H584 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a5A6H584 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a5A6H584 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a5A6H584 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a5A6H584 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a5A6H584 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a5A6H584 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a5A6H584 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a5A6H584 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.12□□□□□ -0.47
Col6a5A6H584 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12.12□□□□□ -0.47
Col6a5A6H584 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a5A6H584 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a5A6H584 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a5A6H584 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a5A6H584 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a5A6H584 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a5A6H584 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a5A6H584 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a5A6H584 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a5A6H584 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Col6a5A6H584 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a5A6H584 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a5A6H584 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a5A6H584 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a5A6H584 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC12.12□□□□□ -0.47
Col6a5A6H584 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a5A6H584 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a5A6H584 Gm8602-201ENSMUST00000184045 607 ntBASIC12.12□□□□□ -0.47
Col6a5A6H584 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.12□□□□□ -0.47
Col6a5A6H584 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.12□□□□□ -0.47
Col6a5A6H584 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.12□□□□□ -0.47
Col6a5A6H584 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a5A6H584 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Col6a5A6H584 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a5A6H584 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Col6a5A6H584 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a5A6H584 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Col6a5A6H584 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a5A6H584 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.11□□□□□ -0.47
Col6a5A6H584 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.11□□□□□ -0.47
Col6a5A6H584 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.11□□□□□ -0.47
Col6a5A6H584 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a5A6H584 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.11□□□□□ -0.47
Col6a5A6H584 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a5A6H584 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.11□□□□□ -0.47
Col6a5A6H584 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a5A6H584 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a5A6H584 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a5A6H584 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a5A6H584 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a5A6H584 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a5A6H584 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Col6a5A6H584 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a5A6H584 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a5A6H584 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.11□□□□□ -0.47
Col6a5A6H584 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.11□□□□□ -0.47
Col6a5A6H584 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a5A6H584 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.11□□□□□ -0.47
Col6a5A6H584 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.11□□□□□ -0.47
Col6a5A6H584 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a5A6H584 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a5A6H584 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a5A6H584 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a5A6H584 Gm15693-201ENSMUST00000120470 637 ntBASIC12.1□□□□□ -0.47
Col6a5A6H584 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a5A6H584 Gm18057-201ENSMUST00000208220 503 ntBASIC12.1□□□□□ -0.47
Col6a5A6H584 Gm18622-201ENSMUST00000219361 595 ntBASIC12.1□□□□□ -0.47
Col6a5A6H584 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a5A6H584 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a5A6H584 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a5A6H584 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC12.1□□□□□ -0.47
Col6a5A6H584 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a5A6H584 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a5A6H584 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a5A6H584 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.1□□□□□ -0.47
Col6a5A6H584 Rpph1-201ENSMUST00000175096 319 ntBASIC12.1□□□□□ -0.47
Col6a5A6H584 Gm27680-201ENSMUST00000184192 160 ntBASIC12.1□□□□□ -0.47
Col6a5A6H584 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a5A6H584 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Col6a5A6H584 Gm45141-201ENSMUST00000206502 1888 ntBASIC12.1□□□□□ -0.47
Col6a5A6H584 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Col6a5A6H584 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms