Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Chd6A3KFM7 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Chd6A3KFM7 Gm15198-201ENSMUST00000117283 177 ntBASIC13.05□□□□□ -0.32
Chd6A3KFM7 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Chd6A3KFM7 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.05□□□□□ -0.32
Chd6A3KFM7 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.05□□□□□ -0.32
Chd6A3KFM7 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Chd6A3KFM7 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Chd6A3KFM7 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.05□□□□□ -0.32
Chd6A3KFM7 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chd6A3KFM7 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chd6A3KFM7 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chd6A3KFM7 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Chd6A3KFM7 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chd6A3KFM7 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chd6A3KFM7 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Chd6A3KFM7 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.05□□□□□ -0.32
Chd6A3KFM7 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.05□□□□□ -0.32
Chd6A3KFM7 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Chd6A3KFM7 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chd6A3KFM7 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Chd6A3KFM7 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chd6A3KFM7 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Chd6A3KFM7 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Chd6A3KFM7 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Chd6A3KFM7 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chd6A3KFM7 AC154171.1-201ENSMUST00000224610 643 ntBASIC13.05□□□□□ -0.32
Chd6A3KFM7 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Chd6A3KFM7 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Chd6A3KFM7 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.05□□□□□ -0.32
Chd6A3KFM7 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chd6A3KFM7 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chd6A3KFM7 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chd6A3KFM7 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.04□□□□□ -0.32
Chd6A3KFM7 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.04□□□□□ -0.32
Chd6A3KFM7 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chd6A3KFM7 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chd6A3KFM7 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chd6A3KFM7 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chd6A3KFM7 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.04□□□□□ -0.32
Chd6A3KFM7 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chd6A3KFM7 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chd6A3KFM7 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chd6A3KFM7 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chd6A3KFM7 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC13.04□□□□□ -0.32
Chd6A3KFM7 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chd6A3KFM7 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chd6A3KFM7 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chd6A3KFM7 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chd6A3KFM7 Gm23984-201ENSMUST00000157139 203 ntBASIC13.04□□□□□ -0.32
Chd6A3KFM7 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.04□□□□□ -0.32
Chd6A3KFM7 Gm4959-201ENSMUST00000197271 1044 ntBASIC13.04□□□□□ -0.32
Chd6A3KFM7 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.04□□□□□ -0.32
Chd6A3KFM7 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chd6A3KFM7 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chd6A3KFM7 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chd6A3KFM7 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chd6A3KFM7 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.04□□□□□ -0.32
Chd6A3KFM7 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Chd6A3KFM7 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chd6A3KFM7 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chd6A3KFM7 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chd6A3KFM7 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chd6A3KFM7 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chd6A3KFM7 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chd6A3KFM7 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chd6A3KFM7 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC13.04□□□□□ -0.32
Chd6A3KFM7 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chd6A3KFM7 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chd6A3KFM7 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chd6A3KFM7 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chd6A3KFM7 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Chd6A3KFM7 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chd6A3KFM7 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Chd6A3KFM7 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chd6A3KFM7 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.03□□□□□ -0.32
Chd6A3KFM7 Gm42939-201ENSMUST00000197514 2205 ntBASIC13.03□□□□□ -0.32
Chd6A3KFM7 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chd6A3KFM7 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chd6A3KFM7 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Chd6A3KFM7 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.03□□□□□ -0.32
Chd6A3KFM7 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chd6A3KFM7 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chd6A3KFM7 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chd6A3KFM7 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Chd6A3KFM7 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chd6A3KFM7 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chd6A3KFM7 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Chd6A3KFM7 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chd6A3KFM7 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.03□□□□□ -0.32
Chd6A3KFM7 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Chd6A3KFM7 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Chd6A3KFM7 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chd6A3KFM7 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chd6A3KFM7 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chd6A3KFM7 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chd6A3KFM7 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chd6A3KFM7 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.02□□□□□ -0.32
Chd6A3KFM7 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Chd6A3KFM7 CT485787.1-201ENSMUST00000225617 968 ntBASIC13.02□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms