Protein–RNA interactions for Protein: A0N8N6

Trav12-2, T cell receptor alpha variable 12-2 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-2A0N8N6 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-2A0N8N6 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.2□□□□□ -0.14
Trav12-2A0N8N6 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-2A0N8N6 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-2A0N8N6 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
Trav12-2A0N8N6 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.2□□□□□ -0.14
Trav12-2A0N8N6 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-2A0N8N6 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-2A0N8N6 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-2A0N8N6 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trav12-2A0N8N6 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-2A0N8N6 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-2A0N8N6 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-2A0N8N6 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-2A0N8N6 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-2A0N8N6 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-2A0N8N6 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-2A0N8N6 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-2A0N8N6 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-2A0N8N6 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-2A0N8N6 Gm10052-201ENSMUST00000168019 960 ntBASIC14.2□□□□□ -0.14
Trav12-2A0N8N6 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trav12-2A0N8N6 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav12-2A0N8N6 Gm7729-201ENSMUST00000050143 801 ntBASIC14.2□□□□□ -0.14
Trav12-2A0N8N6 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-2A0N8N6 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trav12-2A0N8N6 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Trav12-2A0N8N6 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-2A0N8N6 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.2□□□□□ -0.14
Trav12-2A0N8N6 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-2A0N8N6 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-2A0N8N6 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-2A0N8N6 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-2A0N8N6 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-2A0N8N6 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-2A0N8N6 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-2A0N8N6 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-2A0N8N6 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-2A0N8N6 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-2A0N8N6 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-2A0N8N6 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-2A0N8N6 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12-2A0N8N6 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Trav12-2A0N8N6 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.19□□□□□ -0.14
Trav12-2A0N8N6 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12-2A0N8N6 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12-2A0N8N6 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12-2A0N8N6 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12-2A0N8N6 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12-2A0N8N6 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12-2A0N8N6 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav12-2A0N8N6 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trav12-2A0N8N6 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.19□□□□□ -0.14
Trav12-2A0N8N6 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12-2A0N8N6 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav12-2A0N8N6 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12-2A0N8N6 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12-2A0N8N6 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trav12-2A0N8N6 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12-2A0N8N6 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12-2A0N8N6 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12-2A0N8N6 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12-2A0N8N6 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12-2A0N8N6 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Trav12-2A0N8N6 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trav12-2A0N8N6 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12-2A0N8N6 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12-2A0N8N6 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.18□□□□□ -0.14
Trav12-2A0N8N6 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12-2A0N8N6 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12-2A0N8N6 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12-2A0N8N6 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12-2A0N8N6 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12-2A0N8N6 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12-2A0N8N6 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12-2A0N8N6 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12-2A0N8N6 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav12-2A0N8N6 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trav12-2A0N8N6 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12-2A0N8N6 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12-2A0N8N6 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12-2A0N8N6 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12-2A0N8N6 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Trav12-2A0N8N6 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12-2A0N8N6 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12-2A0N8N6 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12-2A0N8N6 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12-2A0N8N6 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12-2A0N8N6 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12-2A0N8N6 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12-2A0N8N6 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12-2A0N8N6 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Trav12-2A0N8N6 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav12-2A0N8N6 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav12-2A0N8N6 Prob1-201ENSMUST00000097619 3021 ntBASIC14.17□□□□□ -0.14
Trav12-2A0N8N6 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12-2A0N8N6 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12-2A0N8N6 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12-2A0N8N6 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12-2A0N8N6 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms