Protein–RNA interactions for Protein: A0A1W2P7H6

Mindy4b-ps, MINDY lysine 48 deubiquitinase 4B, pseudogene, mousemouse

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mindy4b-psA0A1W2P7H6 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.01■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.01■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.01■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.01■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Cmtm5-203ENSMUST00000227441 610 ntBASIC17■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Gm15743-202ENSMUST00000182690 1901 ntBASIC17■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.99■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.99■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.99■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.99■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.99■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.98■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Gm25406-201ENSMUST00000157599 105 ntBASIC16.98■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Gm25745-201ENSMUST00000174945 133 ntBASIC16.98■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.98■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.98■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Gm43347-201ENSMUST00000200226 580 ntBASIC16.98■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mindy4b-psA0A1W2P7H6 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms