Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm3854A0A1B0GSS6 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm3854A0A1B0GSS6 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gm3854A0A1B0GSS6 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm3854A0A1B0GSS6 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.11■□□□□ 0.17
Gm3854A0A1B0GSS6 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm3854A0A1B0GSS6 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
Gm3854A0A1B0GSS6 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.1■□□□□ 0.17
Gm3854A0A1B0GSS6 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm3854A0A1B0GSS6 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm3854A0A1B0GSS6 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Gm3854A0A1B0GSS6 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm3854A0A1B0GSS6 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Gm3854A0A1B0GSS6 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Gm3854A0A1B0GSS6 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm3854A0A1B0GSS6 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm3854A0A1B0GSS6 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm3854A0A1B0GSS6 Gm2756-201ENSMUST00000195851 400 ntBASIC16.1■□□□□ 0.17
Gm3854A0A1B0GSS6 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.1■□□□□ 0.17
Gm3854A0A1B0GSS6 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm3854A0A1B0GSS6 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Gm3854A0A1B0GSS6 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Gm3854A0A1B0GSS6 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Gm3854A0A1B0GSS6 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.1■□□□□ 0.17
Gm3854A0A1B0GSS6 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm3854A0A1B0GSS6 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm3854A0A1B0GSS6 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Gm3854A0A1B0GSS6 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm3854A0A1B0GSS6 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm3854A0A1B0GSS6 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm3854A0A1B0GSS6 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm3854A0A1B0GSS6 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm3854A0A1B0GSS6 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Gm3854A0A1B0GSS6 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm3854A0A1B0GSS6 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm3854A0A1B0GSS6 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm3854A0A1B0GSS6 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Gm3854A0A1B0GSS6 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm3854A0A1B0GSS6 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Gm3854A0A1B0GSS6 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm3854A0A1B0GSS6 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm3854A0A1B0GSS6 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.09■□□□□ 0.17
Gm3854A0A1B0GSS6 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Gm3854A0A1B0GSS6 Mir6404-201ENSMUST00000183699 94 ntBASIC16.09■□□□□ 0.17
Gm3854A0A1B0GSS6 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.09■□□□□ 0.17
Gm3854A0A1B0GSS6 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Gm3854A0A1B0GSS6 Gm18622-201ENSMUST00000219361 595 ntBASIC16.09■□□□□ 0.17
Gm3854A0A1B0GSS6 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC16.09■□□□□ 0.17
Gm3854A0A1B0GSS6 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.09■□□□□ 0.17
Gm3854A0A1B0GSS6 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.09■□□□□ 0.17
Gm3854A0A1B0GSS6 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Gm3854A0A1B0GSS6 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Gm3854A0A1B0GSS6 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm3854A0A1B0GSS6 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm3854A0A1B0GSS6 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm3854A0A1B0GSS6 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Gm3854A0A1B0GSS6 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Gm3854A0A1B0GSS6 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Gm3854A0A1B0GSS6 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Gm3854A0A1B0GSS6 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Gm3854A0A1B0GSS6 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Gm3854A0A1B0GSS6 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Gm3854A0A1B0GSS6 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Gm3854A0A1B0GSS6 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm3854A0A1B0GSS6 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.08■□□□□ 0.16
Gm3854A0A1B0GSS6 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm3854A0A1B0GSS6 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC16.08■□□□□ 0.16
Gm3854A0A1B0GSS6 Gm14822-201ENSMUST00000122247 291 ntBASIC16.08■□□□□ 0.16
Gm3854A0A1B0GSS6 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.08■□□□□ 0.16
Gm3854A0A1B0GSS6 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Gm3854A0A1B0GSS6 Gm24513-201ENSMUST00000174964 138 ntBASIC16.08■□□□□ 0.16
Gm3854A0A1B0GSS6 Gm27397-201ENSMUST00000184997 107 ntBASIC16.08■□□□□ 0.16
Gm3854A0A1B0GSS6 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.08■□□□□ 0.16
Gm3854A0A1B0GSS6 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.08■□□□□ 0.16
Gm3854A0A1B0GSS6 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.08■□□□□ 0.16
Gm3854A0A1B0GSS6 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Gm3854A0A1B0GSS6 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm3854A0A1B0GSS6 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm3854A0A1B0GSS6 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm3854A0A1B0GSS6 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Gm3854A0A1B0GSS6 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm3854A0A1B0GSS6 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Gm3854A0A1B0GSS6 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm3854A0A1B0GSS6 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm3854A0A1B0GSS6 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Gm3854A0A1B0GSS6 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Gm3854A0A1B0GSS6 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Gm3854A0A1B0GSS6 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.07■□□□□ 0.16
Gm3854A0A1B0GSS6 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.07■□□□□ 0.16
Gm3854A0A1B0GSS6 Gm4995-201ENSMUST00000117247 432 ntBASIC16.07■□□□□ 0.16
Gm3854A0A1B0GSS6 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.07■□□□□ 0.16
Gm3854A0A1B0GSS6 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.07■□□□□ 0.16
Gm3854A0A1B0GSS6 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.07■□□□□ 0.16
Gm3854A0A1B0GSS6 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Gm3854A0A1B0GSS6 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.07■□□□□ 0.16
Gm3854A0A1B0GSS6 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.07■□□□□ 0.16
Gm3854A0A1B0GSS6 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.07■□□□□ 0.16
Gm3854A0A1B0GSS6 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.07■□□□□ 0.16
Gm3854A0A1B0GSS6 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.07■□□□□ 0.16
Gm3854A0A1B0GSS6 Gm8825-201ENSMUST00000182565 998 ntBASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms