Protein–RNA interactions for Protein: A0A140T8V5

Pcna-ps2, Proliferating cell nuclear antigen, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcna-ps2A0A140T8V5 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcna-ps2A0A140T8V5 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Pcna-ps2A0A140T8V5 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.24■□□□□ 0.19
Pcna-ps2A0A140T8V5 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcna-ps2A0A140T8V5 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcna-ps2A0A140T8V5 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcna-ps2A0A140T8V5 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcna-ps2A0A140T8V5 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcna-ps2A0A140T8V5 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcna-ps2A0A140T8V5 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcna-ps2A0A140T8V5 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcna-ps2A0A140T8V5 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcna-ps2A0A140T8V5 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Pcna-ps2A0A140T8V5 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
Pcna-ps2A0A140T8V5 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcna-ps2A0A140T8V5 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcna-ps2A0A140T8V5 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcna-ps2A0A140T8V5 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcna-ps2A0A140T8V5 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcna-ps2A0A140T8V5 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcna-ps2A0A140T8V5 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcna-ps2A0A140T8V5 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcna-ps2A0A140T8V5 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcna-ps2A0A140T8V5 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcna-ps2A0A140T8V5 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcna-ps2A0A140T8V5 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcna-ps2A0A140T8V5 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcna-ps2A0A140T8V5 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcna-ps2A0A140T8V5 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcna-ps2A0A140T8V5 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcna-ps2A0A140T8V5 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
Pcna-ps2A0A140T8V5 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcna-ps2A0A140T8V5 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.22■□□□□ 0.19
Pcna-ps2A0A140T8V5 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Pcna-ps2A0A140T8V5 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcna-ps2A0A140T8V5 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcna-ps2A0A140T8V5 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcna-ps2A0A140T8V5 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcna-ps2A0A140T8V5 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Pcna-ps2A0A140T8V5 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcna-ps2A0A140T8V5 Gm11336-201ENSMUST00000118168 334 ntBASIC16.22■□□□□ 0.19
Pcna-ps2A0A140T8V5 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcna-ps2A0A140T8V5 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.22■□□□□ 0.19
Pcna-ps2A0A140T8V5 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcna-ps2A0A140T8V5 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.22■□□□□ 0.19
Pcna-ps2A0A140T8V5 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Pcna-ps2A0A140T8V5 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Pcna-ps2A0A140T8V5 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcna-ps2A0A140T8V5 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcna-ps2A0A140T8V5 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcna-ps2A0A140T8V5 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcna-ps2A0A140T8V5 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
Pcna-ps2A0A140T8V5 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcna-ps2A0A140T8V5 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcna-ps2A0A140T8V5 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Pcna-ps2A0A140T8V5 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcna-ps2A0A140T8V5 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcna-ps2A0A140T8V5 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcna-ps2A0A140T8V5 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Pcna-ps2A0A140T8V5 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcna-ps2A0A140T8V5 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.22■□□□□ 0.19
Pcna-ps2A0A140T8V5 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcna-ps2A0A140T8V5 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcna-ps2A0A140T8V5 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Pcna-ps2A0A140T8V5 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
Pcna-ps2A0A140T8V5 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcna-ps2A0A140T8V5 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcna-ps2A0A140T8V5 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcna-ps2A0A140T8V5 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.21■□□□□ 0.19
Pcna-ps2A0A140T8V5 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcna-ps2A0A140T8V5 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcna-ps2A0A140T8V5 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcna-ps2A0A140T8V5 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.21■□□□□ 0.19
Pcna-ps2A0A140T8V5 Gm18115-201ENSMUST00000221209 621 ntBASIC16.21■□□□□ 0.19
Pcna-ps2A0A140T8V5 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcna-ps2A0A140T8V5 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcna-ps2A0A140T8V5 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcna-ps2A0A140T8V5 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcna-ps2A0A140T8V5 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcna-ps2A0A140T8V5 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcna-ps2A0A140T8V5 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcna-ps2A0A140T8V5 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.18
Pcna-ps2A0A140T8V5 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pcna-ps2A0A140T8V5 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pcna-ps2A0A140T8V5 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pcna-ps2A0A140T8V5 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
Pcna-ps2A0A140T8V5 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pcna-ps2A0A140T8V5 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Pcna-ps2A0A140T8V5 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Pcna-ps2A0A140T8V5 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Pcna-ps2A0A140T8V5 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcna-ps2A0A140T8V5 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Pcna-ps2A0A140T8V5 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcna-ps2A0A140T8V5 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcna-ps2A0A140T8V5 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcna-ps2A0A140T8V5 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcna-ps2A0A140T8V5 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.2■□□□□ 0.18
Pcna-ps2A0A140T8V5 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcna-ps2A0A140T8V5 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcna-ps2A0A140T8V5 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms