Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Gfra2-202ENSMUST00000227633 1480 ntBASIC11.13□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13d-4A0A0G2JFX3 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC11.13□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Gm16042-201ENSMUST00000204813 1247 ntBASIC11.13□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13d-4A0A0G2JFX3 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Gm5421-201ENSMUST00000181698 2354 ntBASIC11.12□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC11.12□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC11.12□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC11.12□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Prob1-201ENSMUST00000097619 3021 ntBASIC11.11□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC11.11□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC11.11□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13d-4A0A0G2JFX3 AC133083.1-201ENSMUST00000221736 2209 ntBASIC11.11□□□□□ -0.63
Trav13d-4A0A0G2JFX3 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC11.11□□□□□ -0.63
Trav13d-4A0A0G2JFX3 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13d-4A0A0G2JFX3 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC11.11□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Otx2os1-204ENSMUST00000227221 751 ntBASIC11.11□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms