Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv8-27A0A0G2JF28 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv8-27A0A0G2JF28 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv8-27A0A0G2JF28 Gm44729-201ENSMUST00000206759 2052 ntBASIC10.16□□□□□ -0.78
Igkv8-27A0A0G2JF28 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv8-27A0A0G2JF28 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv8-27A0A0G2JF28 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv8-27A0A0G2JF28 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv8-27A0A0G2JF28 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv8-27A0A0G2JF28 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC10.16□□□□□ -0.78
Igkv8-27A0A0G2JF28 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv8-27A0A0G2JF28 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv8-27A0A0G2JF28 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv8-27A0A0G2JF28 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Igkv8-27A0A0G2JF28 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv8-27A0A0G2JF28 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Igkv8-27A0A0G2JF28 Gm13234-201ENSMUST00000120010 747 ntBASIC10.16□□□□□ -0.78
Igkv8-27A0A0G2JF28 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC10.16□□□□□ -0.78
Igkv8-27A0A0G2JF28 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv8-27A0A0G2JF28 Rps24-207ENSMUST00000224568 714 ntBASIC10.16□□□□□ -0.78
Igkv8-27A0A0G2JF28 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv8-27A0A0G2JF28 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv8-27A0A0G2JF28 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Igkv8-27A0A0G2JF28 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv8-27A0A0G2JF28 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv8-27A0A0G2JF28 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv8-27A0A0G2JF28 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC10.16□□□□□ -0.78
Igkv8-27A0A0G2JF28 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv8-27A0A0G2JF28 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC10.16□□□□□ -0.78
Igkv8-27A0A0G2JF28 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv8-27A0A0G2JF28 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv8-27A0A0G2JF28 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv8-27A0A0G2JF28 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Igkv8-27A0A0G2JF28 Gm10710-201ENSMUST00000047876 3971 ntBASIC10.16□□□□□ -0.78
Igkv8-27A0A0G2JF28 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv8-27A0A0G2JF28 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Igkv8-27A0A0G2JF28 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Igkv8-27A0A0G2JF28 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Igkv8-27A0A0G2JF28 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Igkv8-27A0A0G2JF28 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Igkv8-27A0A0G2JF28 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Igkv8-27A0A0G2JF28 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Igkv8-27A0A0G2JF28 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Igkv8-27A0A0G2JF28 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Igkv8-27A0A0G2JF28 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Igkv8-27A0A0G2JF28 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Igkv8-27A0A0G2JF28 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Igkv8-27A0A0G2JF28 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Igkv8-27A0A0G2JF28 Wnt10b-205ENSMUST00000226846 1204 ntBASIC10.15□□□□□ -0.78
Igkv8-27A0A0G2JF28 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Igkv8-27A0A0G2JF28 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Igkv8-27A0A0G2JF28 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Igkv8-27A0A0G2JF28 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Igkv8-27A0A0G2JF28 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Igkv8-27A0A0G2JF28 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Igkv8-27A0A0G2JF28 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC10.15□□□□□ -0.78
Igkv8-27A0A0G2JF28 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Igkv8-27A0A0G2JF28 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Igkv8-27A0A0G2JF28 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Igkv8-27A0A0G2JF28 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Igkv8-27A0A0G2JF28 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.79
Igkv8-27A0A0G2JF28 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Igkv8-27A0A0G2JF28 Gm45546-201ENSMUST00000211053 2394 ntBASIC10.15□□□□□ -0.79
Igkv8-27A0A0G2JF28 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.79
Igkv8-27A0A0G2JF28 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Igkv8-27A0A0G2JF28 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Igkv8-27A0A0G2JF28 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC10.14□□□□□ -0.79
Igkv8-27A0A0G2JF28 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Igkv8-27A0A0G2JF28 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Igkv8-27A0A0G2JF28 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Igkv8-27A0A0G2JF28 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Igkv8-27A0A0G2JF28 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Igkv8-27A0A0G2JF28 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Igkv8-27A0A0G2JF28 Gm13509-201ENSMUST00000119733 1308 ntBASIC10.14□□□□□ -0.79
Igkv8-27A0A0G2JF28 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC10.14□□□□□ -0.79
Igkv8-27A0A0G2JF28 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Igkv8-27A0A0G2JF28 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Igkv8-27A0A0G2JF28 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Igkv8-27A0A0G2JF28 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Igkv8-27A0A0G2JF28 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms