Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13n-1A0A0G2JEU8 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC11.72□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC11.72□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Gm27741-201ENSMUST00000185060 237 ntBASIC11.72□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Gm18669-201ENSMUST00000216049 778 ntBASIC11.72□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC11.72□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trav13n-1A0A0G2JEU8 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Gm11841-201ENSMUST00000117060 1963 ntBASIC11.72□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Gm42918-201ENSMUST00000199249 1580 ntBASIC11.71□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC11.71□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13n-1A0A0G2JEU8 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC11.71□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Otx2os1-206ENSMUST00000228153 787 ntBASIC11.71□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC11.71□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-1A0A0G2JEU8 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Gm13216-201ENSMUST00000117145 591 ntBASIC11.7□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC11.7□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-1A0A0G2JEU8 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-1A0A0G2JEU8 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13n-1A0A0G2JEU8 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13n-1A0A0G2JEU8 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms