Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav19A0A0B4J1K4 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav19A0A0B4J1K4 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trav19A0A0B4J1K4 Gm5643-201ENSMUST00000117081 966 ntBASIC12.09□□□□□ -0.47
Trav19A0A0B4J1K4 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav19A0A0B4J1K4 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav19A0A0B4J1K4 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav19A0A0B4J1K4 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav19A0A0B4J1K4 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav19A0A0B4J1K4 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav19A0A0B4J1K4 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav19A0A0B4J1K4 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav19A0A0B4J1K4 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav19A0A0B4J1K4 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav19A0A0B4J1K4 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav19A0A0B4J1K4 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav19A0A0B4J1K4 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trav19A0A0B4J1K4 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav19A0A0B4J1K4 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav19A0A0B4J1K4 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav19A0A0B4J1K4 AC154855.1-201ENSMUST00000227353 1458 ntBASIC12.08□□□□□ -0.47
Trav19A0A0B4J1K4 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav19A0A0B4J1K4 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.08□□□□□ -0.48
Trav19A0A0B4J1K4 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Trav19A0A0B4J1K4 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav19A0A0B4J1K4 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav19A0A0B4J1K4 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav19A0A0B4J1K4 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav19A0A0B4J1K4 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav19A0A0B4J1K4 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC12.08□□□□□ -0.48
Trav19A0A0B4J1K4 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC12.08□□□□□ -0.48
Trav19A0A0B4J1K4 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav19A0A0B4J1K4 Gm44878-201ENSMUST00000205812 1295 ntBASIC12.08□□□□□ -0.48
Trav19A0A0B4J1K4 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC12.08□□□□□ -0.48
Trav19A0A0B4J1K4 Gm7791-201ENSMUST00000219066 539 ntBASIC12.08□□□□□ -0.48
Trav19A0A0B4J1K4 AC159205.3-201ENSMUST00000224614 874 ntBASIC12.08□□□□□ -0.48
Trav19A0A0B4J1K4 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav19A0A0B4J1K4 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav19A0A0B4J1K4 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav19A0A0B4J1K4 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav19A0A0B4J1K4 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.08□□□□□ -0.48
Trav19A0A0B4J1K4 Gm42473-201ENSMUST00000201056 2291 ntBASIC12.08□□□□□ -0.48
Trav19A0A0B4J1K4 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav19A0A0B4J1K4 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav19A0A0B4J1K4 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav19A0A0B4J1K4 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav19A0A0B4J1K4 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav19A0A0B4J1K4 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav19A0A0B4J1K4 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav19A0A0B4J1K4 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav19A0A0B4J1K4 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav19A0A0B4J1K4 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav19A0A0B4J1K4 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.07□□□□□ -0.48
Trav19A0A0B4J1K4 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav19A0A0B4J1K4 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav19A0A0B4J1K4 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav19A0A0B4J1K4 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC12.07□□□□□ -0.48
Trav19A0A0B4J1K4 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav19A0A0B4J1K4 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav19A0A0B4J1K4 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav19A0A0B4J1K4 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav19A0A0B4J1K4 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav19A0A0B4J1K4 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav19A0A0B4J1K4 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav19A0A0B4J1K4 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav19A0A0B4J1K4 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav19A0A0B4J1K4 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav19A0A0B4J1K4 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav19A0A0B4J1K4 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav19A0A0B4J1K4 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav19A0A0B4J1K4 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav19A0A0B4J1K4 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav19A0A0B4J1K4 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav19A0A0B4J1K4 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav19A0A0B4J1K4 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav19A0A0B4J1K4 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Trav19A0A0B4J1K4 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trav19A0A0B4J1K4 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav19A0A0B4J1K4 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav19A0A0B4J1K4 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav19A0A0B4J1K4 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav19A0A0B4J1K4 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav19A0A0B4J1K4 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC12.06□□□□□ -0.48
Trav19A0A0B4J1K4 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC12.06□□□□□ -0.48
Trav19A0A0B4J1K4 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav19A0A0B4J1K4 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav19A0A0B4J1K4 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav19A0A0B4J1K4 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC12.06□□□□□ -0.48
Trav19A0A0B4J1K4 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav19A0A0B4J1K4 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav19A0A0B4J1K4 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav19A0A0B4J1K4 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav19A0A0B4J1K4 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav19A0A0B4J1K4 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav19A0A0B4J1K4 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav19A0A0B4J1K4 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav19A0A0B4J1K4 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav19A0A0B4J1K4 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav19A0A0B4J1K4 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav19A0A0B4J1K4 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms