Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Trav4-3A0A0B4J1K1 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav4-3A0A0B4J1K1 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav4-3A0A0B4J1K1 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav4-3A0A0B4J1K1 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav4-3A0A0B4J1K1 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
Trav4-3A0A0B4J1K1 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trav4-3A0A0B4J1K1 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav4-3A0A0B4J1K1 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav4-3A0A0B4J1K1 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav4-3A0A0B4J1K1 Gm7290-201ENSMUST00000104990 617 ntBASIC11.03□□□□□ -0.64
Trav4-3A0A0B4J1K1 Gm12918-201ENSMUST00000120234 636 ntBASIC11.03□□□□□ -0.64
Trav4-3A0A0B4J1K1 Gm15847-201ENSMUST00000121417 1065 ntBASIC11.03□□□□□ -0.64
Trav4-3A0A0B4J1K1 Gm15710-201ENSMUST00000121821 636 ntBASIC11.03□□□□□ -0.64
Trav4-3A0A0B4J1K1 Gm5075-201ENSMUST00000196916 622 ntBASIC11.03□□□□□ -0.64
Trav4-3A0A0B4J1K1 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav4-3A0A0B4J1K1 AC159205.3-201ENSMUST00000224614 874 ntBASIC11.03□□□□□ -0.64
Trav4-3A0A0B4J1K1 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav4-3A0A0B4J1K1 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC11.03□□□□□ -0.64
Trav4-3A0A0B4J1K1 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC11.03□□□□□ -0.64
Trav4-3A0A0B4J1K1 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav4-3A0A0B4J1K1 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav4-3A0A0B4J1K1 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav4-3A0A0B4J1K1 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav4-3A0A0B4J1K1 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
Trav4-3A0A0B4J1K1 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav4-3A0A0B4J1K1 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trav4-3A0A0B4J1K1 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav4-3A0A0B4J1K1 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav4-3A0A0B4J1K1 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav4-3A0A0B4J1K1 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav4-3A0A0B4J1K1 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav4-3A0A0B4J1K1 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav4-3A0A0B4J1K1 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav4-3A0A0B4J1K1 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav4-3A0A0B4J1K1 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav4-3A0A0B4J1K1 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav4-3A0A0B4J1K1 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC11.02□□□□□ -0.64
Trav4-3A0A0B4J1K1 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Trav4-3A0A0B4J1K1 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav4-3A0A0B4J1K1 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Trav4-3A0A0B4J1K1 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav4-3A0A0B4J1K1 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav4-3A0A0B4J1K1 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav4-3A0A0B4J1K1 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav4-3A0A0B4J1K1 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav4-3A0A0B4J1K1 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Trav4-3A0A0B4J1K1 Gm45546-201ENSMUST00000211053 2394 ntBASIC11.02□□□□□ -0.65
Trav4-3A0A0B4J1K1 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav4-3A0A0B4J1K1 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav4-3A0A0B4J1K1 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav4-3A0A0B4J1K1 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav4-3A0A0B4J1K1 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC11.02□□□□□ -0.65
Trav4-3A0A0B4J1K1 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav4-3A0A0B4J1K1 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav4-3A0A0B4J1K1 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav4-3A0A0B4J1K1 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav4-3A0A0B4J1K1 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav4-3A0A0B4J1K1 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC11.02□□□□□ -0.65
Trav4-3A0A0B4J1K1 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav4-3A0A0B4J1K1 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav4-3A0A0B4J1K1 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav4-3A0A0B4J1K1 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav4-3A0A0B4J1K1 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Trav4-3A0A0B4J1K1 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav4-3A0A0B4J1K1 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav4-3A0A0B4J1K1 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav4-3A0A0B4J1K1 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav4-3A0A0B4J1K1 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav4-3A0A0B4J1K1 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav4-3A0A0B4J1K1 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4-3A0A0B4J1K1 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav4-3A0A0B4J1K1 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4-3A0A0B4J1K1 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4-3A0A0B4J1K1 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4-3A0A0B4J1K1 Sybu-209ENSMUST00000228639 4113 ntBASIC11.01□□□□□ -0.65
Trav4-3A0A0B4J1K1 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4-3A0A0B4J1K1 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Trav4-3A0A0B4J1K1 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4-3A0A0B4J1K1 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Trav4-3A0A0B4J1K1 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4-3A0A0B4J1K1 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4-3A0A0B4J1K1 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4-3A0A0B4J1K1 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC11.01□□□□□ -0.65
Trav4-3A0A0B4J1K1 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4-3A0A0B4J1K1 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4-3A0A0B4J1K1 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC11.01□□□□□ -0.65
Trav4-3A0A0B4J1K1 Gm24841-201ENSMUST00000158676 357 ntBASIC11.01□□□□□ -0.65
Trav4-3A0A0B4J1K1 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC11.01□□□□□ -0.65
Trav4-3A0A0B4J1K1 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4-3A0A0B4J1K1 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4-3A0A0B4J1K1 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Trav4-3A0A0B4J1K1 Mtag2-201ENSMUST00000058665 714 ntBASIC11.01□□□□□ -0.65
Trav4-3A0A0B4J1K1 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4-3A0A0B4J1K1 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4-3A0A0B4J1K1 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4-3A0A0B4J1K1 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4-3A0A0B4J1K1 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav4-3A0A0B4J1K1 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4-3A0A0B4J1K1 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms