Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.69□□□□□ -0.38
Trbv1A0A0B4J1G7 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv1A0A0B4J1G7 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv1A0A0B4J1G7 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv1A0A0B4J1G7 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv1A0A0B4J1G7 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv1A0A0B4J1G7 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC12.69□□□□□ -0.38
Trbv1A0A0B4J1G7 Mir1199-201ENSMUST00000117015 119 ntBASIC12.69□□□□□ -0.38
Trbv1A0A0B4J1G7 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv1A0A0B4J1G7 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv1A0A0B4J1G7 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv1A0A0B4J1G7 AC153881.1-201ENSMUST00000214448 284 ntBASIC12.69□□□□□ -0.38
Trbv1A0A0B4J1G7 Arhgef33-211ENSMUST00000225658 473 ntBASIC12.69□□□□□ -0.38
Trbv1A0A0B4J1G7 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trbv1A0A0B4J1G7 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv1A0A0B4J1G7 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv1A0A0B4J1G7 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv1A0A0B4J1G7 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv1A0A0B4J1G7 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.69□□□□□ -0.38
Trbv1A0A0B4J1G7 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trbv1A0A0B4J1G7 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv1A0A0B4J1G7 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv1A0A0B4J1G7 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv1A0A0B4J1G7 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Trbv1A0A0B4J1G7 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv1A0A0B4J1G7 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv1A0A0B4J1G7 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv1A0A0B4J1G7 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trbv1A0A0B4J1G7 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv1A0A0B4J1G7 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv1A0A0B4J1G7 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.68□□□□□ -0.38
Trbv1A0A0B4J1G7 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv1A0A0B4J1G7 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv1A0A0B4J1G7 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC12.68□□□□□ -0.38
Trbv1A0A0B4J1G7 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trbv1A0A0B4J1G7 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv1A0A0B4J1G7 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv1A0A0B4J1G7 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv1A0A0B4J1G7 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Trbv1A0A0B4J1G7 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv1A0A0B4J1G7 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv1A0A0B4J1G7 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC12.68□□□□□ -0.38
Trbv1A0A0B4J1G7 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC12.68□□□□□ -0.38
Trbv1A0A0B4J1G7 AC175538.1-201ENSMUST00000225343 1269 ntBASIC12.68□□□□□ -0.38
Trbv1A0A0B4J1G7 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv1A0A0B4J1G7 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv1A0A0B4J1G7 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.68□□□□□ -0.38
Trbv1A0A0B4J1G7 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.68□□□□□ -0.38
Trbv1A0A0B4J1G7 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv1A0A0B4J1G7 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC12.68□□□□□ -0.38
Trbv1A0A0B4J1G7 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv1A0A0B4J1G7 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv1A0A0B4J1G7 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Trbv1A0A0B4J1G7 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv1A0A0B4J1G7 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv1A0A0B4J1G7 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv1A0A0B4J1G7 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv1A0A0B4J1G7 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Trbv1A0A0B4J1G7 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv1A0A0B4J1G7 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv1A0A0B4J1G7 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv1A0A0B4J1G7 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv1A0A0B4J1G7 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv1A0A0B4J1G7 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv1A0A0B4J1G7 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv1A0A0B4J1G7 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.67□□□□□ -0.38
Trbv1A0A0B4J1G7 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv1A0A0B4J1G7 Gm42473-201ENSMUST00000201056 2291 ntBASIC12.67□□□□□ -0.38
Trbv1A0A0B4J1G7 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trbv1A0A0B4J1G7 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Trbv1A0A0B4J1G7 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv1A0A0B4J1G7 Gm24841-201ENSMUST00000158676 357 ntBASIC12.67□□□□□ -0.38
Trbv1A0A0B4J1G7 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC12.67□□□□□ -0.38
Trbv1A0A0B4J1G7 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv1A0A0B4J1G7 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC12.67□□□□□ -0.38
Trbv1A0A0B4J1G7 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv1A0A0B4J1G7 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv1A0A0B4J1G7 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv1A0A0B4J1G7 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trbv1A0A0B4J1G7 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Trbv1A0A0B4J1G7 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv1A0A0B4J1G7 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv1A0A0B4J1G7 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv1A0A0B4J1G7 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv1A0A0B4J1G7 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trbv1A0A0B4J1G7 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC12.67□□□□□ -0.38
Trbv1A0A0B4J1G7 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trbv1A0A0B4J1G7 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv1A0A0B4J1G7 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv1A0A0B4J1G7 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv1A0A0B4J1G7 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv1A0A0B4J1G7 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv1A0A0B4J1G7 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv1A0A0B4J1G7 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv1A0A0B4J1G7 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv1A0A0B4J1G7 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trbv1A0A0B4J1G7 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv1A0A0B4J1G7 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv1A0A0B4J1G7 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv1A0A0B4J1G7 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms