Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Nrn1-203ENSMUST00000223611 1443 ntBASIC13.06□□□□□ -0.32
Trav6d-5A0A075B6B9 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-5A0A075B6B9 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-5A0A075B6B9 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Trav6d-5A0A075B6B9 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-5A0A075B6B9 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-5A0A075B6B9 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-5A0A075B6B9 Gm12085-201ENSMUST00000119263 940 ntBASIC13.06□□□□□ -0.32
Trav6d-5A0A075B6B9 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC13.06□□□□□ -0.32
Trav6d-5A0A075B6B9 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC13.06□□□□□ -0.32
Trav6d-5A0A075B6B9 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC13.06□□□□□ -0.32
Trav6d-5A0A075B6B9 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav6d-5A0A075B6B9 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-5A0A075B6B9 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-5A0A075B6B9 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-5A0A075B6B9 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-5A0A075B6B9 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-5A0A075B6B9 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-5A0A075B6B9 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-5A0A075B6B9 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-5A0A075B6B9 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav6d-5A0A075B6B9 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.06□□□□□ -0.32
Trav6d-5A0A075B6B9 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-5A0A075B6B9 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav6d-5A0A075B6B9 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-5A0A075B6B9 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-5A0A075B6B9 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-5A0A075B6B9 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav6d-5A0A075B6B9 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Trav6d-5A0A075B6B9 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-5A0A075B6B9 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-5A0A075B6B9 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-5A0A075B6B9 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-5A0A075B6B9 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-5A0A075B6B9 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Trav6d-5A0A075B6B9 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-5A0A075B6B9 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-5A0A075B6B9 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-5A0A075B6B9 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-5A0A075B6B9 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-5A0A075B6B9 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trav6d-5A0A075B6B9 Gm18115-201ENSMUST00000221209 621 ntBASIC13.05□□□□□ -0.32
Trav6d-5A0A075B6B9 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-5A0A075B6B9 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-5A0A075B6B9 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-5A0A075B6B9 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-5A0A075B6B9 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-5A0A075B6B9 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-5A0A075B6B9 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-5A0A075B6B9 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-5A0A075B6B9 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-5A0A075B6B9 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-5A0A075B6B9 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav6d-5A0A075B6B9 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6d-5A0A075B6B9 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-5A0A075B6B9 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-5A0A075B6B9 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav6d-5A0A075B6B9 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-5A0A075B6B9 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-5A0A075B6B9 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-5A0A075B6B9 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trav6d-5A0A075B6B9 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.04□□□□□ -0.32
Trav6d-5A0A075B6B9 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-5A0A075B6B9 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-5A0A075B6B9 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-5A0A075B6B9 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC13.04□□□□□ -0.32
Trav6d-5A0A075B6B9 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC13.04□□□□□ -0.32
Trav6d-5A0A075B6B9 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-5A0A075B6B9 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-5A0A075B6B9 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Trav6d-5A0A075B6B9 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-5A0A075B6B9 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-5A0A075B6B9 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-5A0A075B6B9 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.04□□□□□ -0.32
Trav6d-5A0A075B6B9 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-5A0A075B6B9 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-5A0A075B6B9 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-5A0A075B6B9 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-5A0A075B6B9 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav6d-5A0A075B6B9 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-5A0A075B6B9 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-5A0A075B6B9 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Trav6d-5A0A075B6B9 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-5A0A075B6B9 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trav6d-5A0A075B6B9 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.04□□□□□ -0.32
Trav6d-5A0A075B6B9 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6d-5A0A075B6B9 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6d-5A0A075B6B9 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Trav6d-5A0A075B6B9 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav6d-5A0A075B6B9 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6d-5A0A075B6B9 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6d-5A0A075B6B9 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6d-5A0A075B6B9 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav6d-5A0A075B6B9 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6d-5A0A075B6B9 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trav6d-5A0A075B6B9 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6d-5A0A075B6B9 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6d-5A0A075B6B9 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6d-5A0A075B6B9 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
Trav6d-5A0A075B6B9 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms