Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-5A0A075B6B5 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.53□□□□□ -0.4
Trav6-5A0A075B6B5 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-5A0A075B6B5 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-5A0A075B6B5 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-5A0A075B6B5 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav6-5A0A075B6B5 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-5A0A075B6B5 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-5A0A075B6B5 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-5A0A075B6B5 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6-5A0A075B6B5 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6-5A0A075B6B5 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6-5A0A075B6B5 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
Trav6-5A0A075B6B5 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6-5A0A075B6B5 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6-5A0A075B6B5 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6-5A0A075B6B5 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-5A0A075B6B5 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav6-5A0A075B6B5 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-5A0A075B6B5 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Trav6-5A0A075B6B5 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-5A0A075B6B5 Gm14464-201ENSMUST00000119658 1254 ntBASIC12.52□□□□□ -0.41
Trav6-5A0A075B6B5 AC163280.1-201ENSMUST00000228194 1100 ntBASIC12.52□□□□□ -0.41
Trav6-5A0A075B6B5 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-5A0A075B6B5 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-5A0A075B6B5 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trav6-5A0A075B6B5 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav6-5A0A075B6B5 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Trav6-5A0A075B6B5 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav6-5A0A075B6B5 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-5A0A075B6B5 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-5A0A075B6B5 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-5A0A075B6B5 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-5A0A075B6B5 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-5A0A075B6B5 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-5A0A075B6B5 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-5A0A075B6B5 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-5A0A075B6B5 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-5A0A075B6B5 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-5A0A075B6B5 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Trav6-5A0A075B6B5 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-5A0A075B6B5 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-5A0A075B6B5 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-5A0A075B6B5 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC12.51□□□□□ -0.41
Trav6-5A0A075B6B5 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-5A0A075B6B5 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav6-5A0A075B6B5 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Trav6-5A0A075B6B5 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.51□□□□□ -0.41
Trav6-5A0A075B6B5 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-5A0A075B6B5 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-5A0A075B6B5 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-5A0A075B6B5 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-5A0A075B6B5 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-5A0A075B6B5 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trav6-5A0A075B6B5 Actl10-202ENSMUST00000226583 1501 ntBASIC12.51□□□□□ -0.41
Trav6-5A0A075B6B5 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-5A0A075B6B5 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-5A0A075B6B5 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-5A0A075B6B5 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav6-5A0A075B6B5 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-5A0A075B6B5 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-5A0A075B6B5 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-5A0A075B6B5 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Trav6-5A0A075B6B5 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav6-5A0A075B6B5 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-5A0A075B6B5 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-5A0A075B6B5 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.5□□□□□ -0.41
Trav6-5A0A075B6B5 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-5A0A075B6B5 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-5A0A075B6B5 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-5A0A075B6B5 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-5A0A075B6B5 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-5A0A075B6B5 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-5A0A075B6B5 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-5A0A075B6B5 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-5A0A075B6B5 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-5A0A075B6B5 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-5A0A075B6B5 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav6-5A0A075B6B5 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-5A0A075B6B5 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-5A0A075B6B5 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav6-5A0A075B6B5 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-5A0A075B6B5 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC12.5□□□□□ -0.41
Trav6-5A0A075B6B5 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-5A0A075B6B5 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-5A0A075B6B5 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC12.5□□□□□ -0.41
Trav6-5A0A075B6B5 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-5A0A075B6B5 Gm42642-201ENSMUST00000200683 355 ntBASIC12.5□□□□□ -0.41
Trav6-5A0A075B6B5 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-5A0A075B6B5 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-5A0A075B6B5 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-5A0A075B6B5 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-5A0A075B6B5 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-5A0A075B6B5 Dio3-201ENSMUST00000097228 1449 ntBASIC12.5□□□□□ -0.41
Trav6-5A0A075B6B5 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trav6-5A0A075B6B5 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trav6-5A0A075B6B5 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-5A0A075B6B5 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-5A0A075B6B5 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav6-5A0A075B6B5 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms