Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Trav6-4A0A075B6B4 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trav6-4A0A075B6B4 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-4A0A075B6B4 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-4A0A075B6B4 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-4A0A075B6B4 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-4A0A075B6B4 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-4A0A075B6B4 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-4A0A075B6B4 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-4A0A075B6B4 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-4A0A075B6B4 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-4A0A075B6B4 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-4A0A075B6B4 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-4A0A075B6B4 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.43□□□□□ -0.42
Trav6-4A0A075B6B4 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-4A0A075B6B4 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-4A0A075B6B4 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-4A0A075B6B4 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-4A0A075B6B4 Gm33142-201ENSMUST00000193913 867 ntBASIC12.43□□□□□ -0.42
Trav6-4A0A075B6B4 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC12.43□□□□□ -0.42
Trav6-4A0A075B6B4 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav6-4A0A075B6B4 AC125350.1-201ENSMUST00000225115 903 ntBASIC12.43□□□□□ -0.42
Trav6-4A0A075B6B4 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC12.43□□□□□ -0.42
Trav6-4A0A075B6B4 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-4A0A075B6B4 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-4A0A075B6B4 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-4A0A075B6B4 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav6-4A0A075B6B4 Gm43548-201ENSMUST00000197139 2353 ntBASIC12.43□□□□□ -0.42
Trav6-4A0A075B6B4 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-4A0A075B6B4 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-4A0A075B6B4 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trav6-4A0A075B6B4 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-4A0A075B6B4 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-4A0A075B6B4 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-4A0A075B6B4 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trav6-4A0A075B6B4 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-4A0A075B6B4 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-4A0A075B6B4 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-4A0A075B6B4 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-4A0A075B6B4 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-4A0A075B6B4 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-4A0A075B6B4 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-4A0A075B6B4 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-4A0A075B6B4 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-4A0A075B6B4 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-4A0A075B6B4 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-4A0A075B6B4 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-4A0A075B6B4 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-4A0A075B6B4 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-4A0A075B6B4 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-4A0A075B6B4 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav6-4A0A075B6B4 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-4A0A075B6B4 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trav6-4A0A075B6B4 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-4A0A075B6B4 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-4A0A075B6B4 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trav6-4A0A075B6B4 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-4A0A075B6B4 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-4A0A075B6B4 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-4A0A075B6B4 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC12.42□□□□□ -0.42
Trav6-4A0A075B6B4 AC130713.1-201ENSMUST00000228853 1096 ntBASIC12.42□□□□□ -0.42
Trav6-4A0A075B6B4 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trav6-4A0A075B6B4 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trav6-4A0A075B6B4 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-4A0A075B6B4 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-4A0A075B6B4 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-4A0A075B6B4 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-4A0A075B6B4 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-4A0A075B6B4 Gm32996-201ENSMUST00000199828 1447 ntBASIC12.42□□□□□ -0.42
Trav6-4A0A075B6B4 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-4A0A075B6B4 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-4A0A075B6B4 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-4A0A075B6B4 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-4A0A075B6B4 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-4A0A075B6B4 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-4A0A075B6B4 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-4A0A075B6B4 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-4A0A075B6B4 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-4A0A075B6B4 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-4A0A075B6B4 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trav6-4A0A075B6B4 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trav6-4A0A075B6B4 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-4A0A075B6B4 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-4A0A075B6B4 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-4A0A075B6B4 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-4A0A075B6B4 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-4A0A075B6B4 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-4A0A075B6B4 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-4A0A075B6B4 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-4A0A075B6B4 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-4A0A075B6B4 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-4A0A075B6B4 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-4A0A075B6B4 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-4A0A075B6B4 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-4A0A075B6B4 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-4A0A075B6B4 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-4A0A075B6B4 Gm14859-201ENSMUST00000117752 357 ntBASIC12.41□□□□□ -0.42
Trav6-4A0A075B6B4 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trav6-4A0A075B6B4 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-4A0A075B6B4 Gm27704-201ENSMUST00000185094 107 ntBASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms