Protein–RNA interactions for Protein: A0A075B657

Trdv1, T cell receptor delta variable 1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv1A0A075B657 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv1A0A075B657 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv1A0A075B657 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv1A0A075B657 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv1A0A075B657 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv1A0A075B657 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC12.31□□□□□ -0.44
Trdv1A0A075B657 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv1A0A075B657 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv1A0A075B657 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv1A0A075B657 Gm12527-201ENSMUST00000117967 564 ntBASIC12.31□□□□□ -0.44
Trdv1A0A075B657 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv1A0A075B657 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv1A0A075B657 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv1A0A075B657 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv1A0A075B657 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv1A0A075B657 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Trdv1A0A075B657 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv1A0A075B657 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv1A0A075B657 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trdv1A0A075B657 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv1A0A075B657 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC12.31□□□□□ -0.44
Trdv1A0A075B657 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv1A0A075B657 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv1A0A075B657 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv1A0A075B657 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trdv1A0A075B657 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv1A0A075B657 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv1A0A075B657 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv1A0A075B657 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv1A0A075B657 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv1A0A075B657 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv1A0A075B657 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv1A0A075B657 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv1A0A075B657 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv1A0A075B657 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv1A0A075B657 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trdv1A0A075B657 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv1A0A075B657 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Trdv1A0A075B657 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv1A0A075B657 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv1A0A075B657 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv1A0A075B657 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv1A0A075B657 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv1A0A075B657 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv1A0A075B657 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv1A0A075B657 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv1A0A075B657 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC12.3□□□□□ -0.44
Trdv1A0A075B657 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC12.3□□□□□ -0.44
Trdv1A0A075B657 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC12.3□□□□□ -0.44
Trdv1A0A075B657 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv1A0A075B657 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC12.3□□□□□ -0.44
Trdv1A0A075B657 Gm16042-201ENSMUST00000204813 1247 ntBASIC12.3□□□□□ -0.44
Trdv1A0A075B657 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC12.3□□□□□ -0.44
Trdv1A0A075B657 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC12.3□□□□□ -0.44
Trdv1A0A075B657 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv1A0A075B657 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC12.3□□□□□ -0.44
Trdv1A0A075B657 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv1A0A075B657 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trdv1A0A075B657 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Trdv1A0A075B657 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv1A0A075B657 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv1A0A075B657 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv1A0A075B657 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv1A0A075B657 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv1A0A075B657 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv1A0A075B657 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv1A0A075B657 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv1A0A075B657 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv1A0A075B657 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv1A0A075B657 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trdv1A0A075B657 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trdv1A0A075B657 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trdv1A0A075B657 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trdv1A0A075B657 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trdv1A0A075B657 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trdv1A0A075B657 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trdv1A0A075B657 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trdv1A0A075B657 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trdv1A0A075B657 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trdv1A0A075B657 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trdv1A0A075B657 Phf7-203ENSMUST00000226565 1971 ntBASIC12.29□□□□□ -0.44
Trdv1A0A075B657 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Trdv1A0A075B657 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trdv1A0A075B657 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC12.29□□□□□ -0.44
Trdv1A0A075B657 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trdv1A0A075B657 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trdv1A0A075B657 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trdv1A0A075B657 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Trdv1A0A075B657 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trdv1A0A075B657 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC12.29□□□□□ -0.44
Trdv1A0A075B657 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trdv1A0A075B657 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trdv1A0A075B657 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trdv1A0A075B657 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.28□□□□□ -0.44
Trdv1A0A075B657 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Trdv1A0A075B657 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC12.28□□□□□ -0.44
Trdv1A0A075B657 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trdv1A0A075B657 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trdv1A0A075B657 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trdv1A0A075B657 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms