Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav18A0A075B656 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav18A0A075B656 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav18A0A075B656 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav18A0A075B656 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav18A0A075B656 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav18A0A075B656 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav18A0A075B656 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav18A0A075B656 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav18A0A075B656 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav18A0A075B656 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav18A0A075B656 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav18A0A075B656 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.24□□□□□ -0.29
Trav18A0A075B656 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav18A0A075B656 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trav18A0A075B656 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav18A0A075B656 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav18A0A075B656 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav18A0A075B656 Gm11336-201ENSMUST00000118168 334 ntBASIC13.24□□□□□ -0.29
Trav18A0A075B656 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Trav18A0A075B656 Gm13474-201ENSMUST00000122466 815 ntBASIC13.24□□□□□ -0.29
Trav18A0A075B656 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC13.24□□□□□ -0.29
Trav18A0A075B656 Gm20472-201ENSMUST00000174403 1240 ntBASIC13.24□□□□□ -0.29
Trav18A0A075B656 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC13.24□□□□□ -0.29
Trav18A0A075B656 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav18A0A075B656 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav18A0A075B656 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav18A0A075B656 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Trav18A0A075B656 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav18A0A075B656 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav18A0A075B656 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.24□□□□□ -0.29
Trav18A0A075B656 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav18A0A075B656 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav18A0A075B656 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav18A0A075B656 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Trav18A0A075B656 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav18A0A075B656 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav18A0A075B656 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav18A0A075B656 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav18A0A075B656 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav18A0A075B656 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav18A0A075B656 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav18A0A075B656 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav18A0A075B656 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav18A0A075B656 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav18A0A075B656 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav18A0A075B656 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav18A0A075B656 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav18A0A075B656 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.23□□□□□ -0.29
Trav18A0A075B656 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav18A0A075B656 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC13.23□□□□□ -0.29
Trav18A0A075B656 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC13.23□□□□□ -0.29
Trav18A0A075B656 AL672049.1-201ENSMUST00000197943 91 ntBASIC13.23□□□□□ -0.29
Trav18A0A075B656 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC13.23□□□□□ -0.29
Trav18A0A075B656 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trav18A0A075B656 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav18A0A075B656 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav18A0A075B656 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC13.23□□□□□ -0.29
Trav18A0A075B656 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav18A0A075B656 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav18A0A075B656 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav18A0A075B656 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav18A0A075B656 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav18A0A075B656 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav18A0A075B656 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav18A0A075B656 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav18A0A075B656 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trav18A0A075B656 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav18A0A075B656 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav18A0A075B656 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav18A0A075B656 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav18A0A075B656 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav18A0A075B656 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC13.22□□□□□ -0.29
Trav18A0A075B656 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trav18A0A075B656 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav18A0A075B656 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav18A0A075B656 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav18A0A075B656 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav18A0A075B656 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav18A0A075B656 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav18A0A075B656 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav18A0A075B656 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav18A0A075B656 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC13.22□□□□□ -0.29
Trav18A0A075B656 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav18A0A075B656 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav18A0A075B656 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trav18A0A075B656 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav18A0A075B656 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trav18A0A075B656 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav18A0A075B656 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav18A0A075B656 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav18A0A075B656 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav18A0A075B656 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav18A0A075B656 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav18A0A075B656 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav18A0A075B656 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav18A0A075B656 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.22□□□□□ -0.29
Trav18A0A075B656 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav18A0A075B656 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav18A0A075B656 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms