Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-7-dv9A0A075B639 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-7-dv9A0A075B639 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-7-dv9A0A075B639 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-7-dv9A0A075B639 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.32□□□□□ -0.12
Trav6-7-dv9A0A075B639 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-7-dv9A0A075B639 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.32□□□□□ -0.12
Trav6-7-dv9A0A075B639 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-7-dv9A0A075B639 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.32□□□□□ -0.12
Trav6-7-dv9A0A075B639 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-7-dv9A0A075B639 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-7-dv9A0A075B639 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-7-dv9A0A075B639 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-7-dv9A0A075B639 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-7-dv9A0A075B639 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-7-dv9A0A075B639 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-7-dv9A0A075B639 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-7-dv9A0A075B639 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-7-dv9A0A075B639 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-7-dv9A0A075B639 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trav6-7-dv9A0A075B639 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-7-dv9A0A075B639 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav6-7-dv9A0A075B639 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-7-dv9A0A075B639 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-7-dv9A0A075B639 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-7-dv9A0A075B639 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-7-dv9A0A075B639 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-7-dv9A0A075B639 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Trav6-7-dv9A0A075B639 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Trav6-7-dv9A0A075B639 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trav6-7-dv9A0A075B639 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav6-7-dv9A0A075B639 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
Trav6-7-dv9A0A075B639 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Trav6-7-dv9A0A075B639 Gm44430-201ENSMUST00000203376 995 ntBASIC14.31□□□□□ -0.12
Trav6-7-dv9A0A075B639 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-7-dv9A0A075B639 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-7-dv9A0A075B639 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-7-dv9A0A075B639 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-7-dv9A0A075B639 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trav6-7-dv9A0A075B639 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-7-dv9A0A075B639 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-7-dv9A0A075B639 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-7-dv9A0A075B639 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-7-dv9A0A075B639 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-7-dv9A0A075B639 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-7-dv9A0A075B639 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-7-dv9A0A075B639 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-7-dv9A0A075B639 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.31□□□□□ -0.12
Trav6-7-dv9A0A075B639 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-7-dv9A0A075B639 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-7-dv9A0A075B639 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-7-dv9A0A075B639 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-7-dv9A0A075B639 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-7-dv9A0A075B639 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-7-dv9A0A075B639 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trav6-7-dv9A0A075B639 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.3□□□□□ -0.12
Trav6-7-dv9A0A075B639 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-7-dv9A0A075B639 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trav6-7-dv9A0A075B639 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-7-dv9A0A075B639 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-7-dv9A0A075B639 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-7-dv9A0A075B639 Gm9013-201ENSMUST00000132939 882 ntBASIC14.3□□□□□ -0.12
Trav6-7-dv9A0A075B639 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Trav6-7-dv9A0A075B639 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-7-dv9A0A075B639 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav6-7-dv9A0A075B639 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.3□□□□□ -0.12
Trav6-7-dv9A0A075B639 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-7-dv9A0A075B639 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-7-dv9A0A075B639 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trav6-7-dv9A0A075B639 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trav6-7-dv9A0A075B639 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-7-dv9A0A075B639 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-7-dv9A0A075B639 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-7-dv9A0A075B639 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-7-dv9A0A075B639 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-7-dv9A0A075B639 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-7-dv9A0A075B639 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-7-dv9A0A075B639 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-7-dv9A0A075B639 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-7-dv9A0A075B639 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-7-dv9A0A075B639 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-7-dv9A0A075B639 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav6-7-dv9A0A075B639 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-7-dv9A0A075B639 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-7-dv9A0A075B639 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.29□□□□□ -0.12
Trav6-7-dv9A0A075B639 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-7-dv9A0A075B639 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav6-7-dv9A0A075B639 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.29□□□□□ -0.12
Trav6-7-dv9A0A075B639 Dancr-204ENSMUST00000132389 2347 ntBASIC14.29□□□□□ -0.12
Trav6-7-dv9A0A075B639 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-7-dv9A0A075B639 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-7-dv9A0A075B639 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav6-7-dv9A0A075B639 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.29□□□□□ -0.12
Trav6-7-dv9A0A075B639 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-7-dv9A0A075B639 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav6-7-dv9A0A075B639 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav6-7-dv9A0A075B639 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-7-dv9A0A075B639 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trav6-7-dv9A0A075B639 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav6-7-dv9A0A075B639 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms