Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Gm12382-201ENSMUST00000122005 922 ntBASIC12.53□□□□□ -0.4
Trav6n-5A0A075B621 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav6n-5A0A075B621 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav6n-5A0A075B621 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6n-5A0A075B621 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6n-5A0A075B621 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6n-5A0A075B621 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6n-5A0A075B621 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6n-5A0A075B621 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6n-5A0A075B621 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6n-5A0A075B621 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6n-5A0A075B621 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6n-5A0A075B621 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6n-5A0A075B621 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.53□□□□□ -0.4
Trav6n-5A0A075B621 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6n-5A0A075B621 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6n-5A0A075B621 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Trav6n-5A0A075B621 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6n-5A0A075B621 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6n-5A0A075B621 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav6n-5A0A075B621 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6n-5A0A075B621 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6n-5A0A075B621 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6n-5A0A075B621 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6n-5A0A075B621 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6n-5A0A075B621 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6n-5A0A075B621 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
Trav6n-5A0A075B621 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6n-5A0A075B621 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6n-5A0A075B621 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6n-5A0A075B621 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6n-5A0A075B621 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav6n-5A0A075B621 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6n-5A0A075B621 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Trav6n-5A0A075B621 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6n-5A0A075B621 Gm14464-201ENSMUST00000119658 1254 ntBASIC12.52□□□□□ -0.41
Trav6n-5A0A075B621 AC163280.1-201ENSMUST00000228194 1100 ntBASIC12.52□□□□□ -0.41
Trav6n-5A0A075B621 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6n-5A0A075B621 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6n-5A0A075B621 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trav6n-5A0A075B621 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav6n-5A0A075B621 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Trav6n-5A0A075B621 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav6n-5A0A075B621 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6n-5A0A075B621 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6n-5A0A075B621 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6n-5A0A075B621 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6n-5A0A075B621 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6n-5A0A075B621 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6n-5A0A075B621 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6n-5A0A075B621 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6n-5A0A075B621 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6n-5A0A075B621 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6n-5A0A075B621 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Trav6n-5A0A075B621 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6n-5A0A075B621 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6n-5A0A075B621 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6n-5A0A075B621 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC12.51□□□□□ -0.41
Trav6n-5A0A075B621 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6n-5A0A075B621 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav6n-5A0A075B621 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Trav6n-5A0A075B621 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.51□□□□□ -0.41
Trav6n-5A0A075B621 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6n-5A0A075B621 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6n-5A0A075B621 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6n-5A0A075B621 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6n-5A0A075B621 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trav6n-5A0A075B621 Actl10-202ENSMUST00000226583 1501 ntBASIC12.51□□□□□ -0.41
Trav6n-5A0A075B621 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6n-5A0A075B621 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6n-5A0A075B621 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6n-5A0A075B621 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav6n-5A0A075B621 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6n-5A0A075B621 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6n-5A0A075B621 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6n-5A0A075B621 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6n-5A0A075B621 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6n-5A0A075B621 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.5□□□□□ -0.41
Trav6n-5A0A075B621 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6n-5A0A075B621 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6n-5A0A075B621 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6n-5A0A075B621 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6n-5A0A075B621 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6n-5A0A075B621 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6n-5A0A075B621 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6n-5A0A075B621 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6n-5A0A075B621 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6n-5A0A075B621 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6n-5A0A075B621 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6n-5A0A075B621 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav6n-5A0A075B621 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6n-5A0A075B621 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6n-5A0A075B621 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav6n-5A0A075B621 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6n-5A0A075B621 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC12.5□□□□□ -0.41
Trav6n-5A0A075B621 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6n-5A0A075B621 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6n-5A0A075B621 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC12.5□□□□□ -0.41
Trav6n-5A0A075B621 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6n-5A0A075B621 Gm42642-201ENSMUST00000200683 355 ntBASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms