Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9-1A0A075B601 Prob1-201ENSMUST00000097619 3021 ntBASIC12.63□□□□□ -0.39
Trav9-1A0A075B601 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC12.63□□□□□ -0.39
Trav9-1A0A075B601 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9-1A0A075B601 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9-1A0A075B601 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trav9-1A0A075B601 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9-1A0A075B601 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9-1A0A075B601 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9-1A0A075B601 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9-1A0A075B601 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9-1A0A075B601 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9-1A0A075B601 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9-1A0A075B601 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9-1A0A075B601 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9-1A0A075B601 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9-1A0A075B601 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9-1A0A075B601 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9-1A0A075B601 Gm13474-201ENSMUST00000122466 815 ntBASIC12.62□□□□□ -0.39
Trav9-1A0A075B601 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9-1A0A075B601 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9-1A0A075B601 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC12.62□□□□□ -0.39
Trav9-1A0A075B601 AC159205.6-201ENSMUST00000224935 887 ntBASIC12.62□□□□□ -0.39
Trav9-1A0A075B601 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9-1A0A075B601 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC12.62□□□□□ -0.39
Trav9-1A0A075B601 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9-1A0A075B601 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9-1A0A075B601 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9-1A0A075B601 AC133083.1-201ENSMUST00000221736 2209 ntBASIC12.62□□□□□ -0.39
Trav9-1A0A075B601 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9-1A0A075B601 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9-1A0A075B601 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9-1A0A075B601 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Trav9-1A0A075B601 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav9-1A0A075B601 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9-1A0A075B601 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav9-1A0A075B601 CT010478.1-201ENSMUST00000220747 2787 ntBASIC12.62□□□□□ -0.39
Trav9-1A0A075B601 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9-1A0A075B601 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9-1A0A075B601 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav9-1A0A075B601 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9-1A0A075B601 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9-1A0A075B601 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9-1A0A075B601 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9-1A0A075B601 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC12.61□□□□□ -0.39
Trav9-1A0A075B601 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9-1A0A075B601 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9-1A0A075B601 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9-1A0A075B601 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9-1A0A075B601 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9-1A0A075B601 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9-1A0A075B601 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav9-1A0A075B601 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9-1A0A075B601 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Trav9-1A0A075B601 Gm11336-201ENSMUST00000118168 334 ntBASIC12.61□□□□□ -0.39
Trav9-1A0A075B601 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Trav9-1A0A075B601 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC12.61□□□□□ -0.39
Trav9-1A0A075B601 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav9-1A0A075B601 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9-1A0A075B601 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9-1A0A075B601 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9-1A0A075B601 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9-1A0A075B601 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9-1A0A075B601 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Trav9-1A0A075B601 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9-1A0A075B601 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9-1A0A075B601 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav9-1A0A075B601 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9-1A0A075B601 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9-1A0A075B601 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9-1A0A075B601 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav9-1A0A075B601 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9-1A0A075B601 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9-1A0A075B601 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav9-1A0A075B601 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9-1A0A075B601 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9-1A0A075B601 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9-1A0A075B601 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9-1A0A075B601 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9-1A0A075B601 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9-1A0A075B601 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9-1A0A075B601 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9-1A0A075B601 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9-1A0A075B601 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9-1A0A075B601 Gm13559-201ENSMUST00000120476 863 ntBASIC12.6□□□□□ -0.39
Trav9-1A0A075B601 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9-1A0A075B601 Gm29994-201ENSMUST00000195495 1193 ntBASIC12.6□□□□□ -0.39
Trav9-1A0A075B601 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav9-1A0A075B601 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9-1A0A075B601 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9-1A0A075B601 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9-1A0A075B601 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9-1A0A075B601 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9-1A0A075B601 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav9-1A0A075B601 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9-1A0A075B601 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav9-1A0A075B601 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9-1A0A075B601 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9-1A0A075B601 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav9-1A0A075B601 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms