Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 RNU6-2-201ENST00000384627 107 ntBASIC1.17□□□□□ -2.22
RHBDD3Q9Y3P4 RNU6-29P-201ENST00000384637 107 ntBASIC1.17□□□□□ -2.22
RHBDD3Q9Y3P4 RNU6-1060P-201ENST00000384664 107 ntBASIC1.17□□□□□ -2.22
RHBDD3Q9Y3P4 RNU6-9-201ENST00000384776 107 ntBASIC1.17□□□□□ -2.22
RHBDD3Q9Y3P4 RNU6-33P-201ENST00000384793 107 ntBASIC1.17□□□□□ -2.22
RHBDD3Q9Y3P4 SNORA17.3-201ENST00000391159 129 ntBASIC1.17□□□□□ -2.22
RHBDD3Q9Y3P4 RPS29P13-201ENST00000402041 169 ntBASIC1.17□□□□□ -2.22
RHBDD3Q9Y3P4 RPL37P10-201ENST00000412884 288 ntBASIC1.17□□□□□ -2.22
RHBDD3Q9Y3P4 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.17□□□□□ -2.22
RHBDD3Q9Y3P4 AL133396.1-201ENST00000432048 687 ntBASIC1.17□□□□□ -2.22
RHBDD3Q9Y3P4 AL135790.2-201ENST00000437701 267 ntBASIC1.17□□□□□ -2.22
RHBDD3Q9Y3P4 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.17□□□□□ -2.22
RHBDD3Q9Y3P4 snoU13.23-201ENST00000458863 104 ntBASIC1.17□□□□□ -2.22
RHBDD3Q9Y3P4 MTCYBP18-201ENST00000501056 747 ntBASIC1.17□□□□□ -2.22
RHBDD3Q9Y3P4 AC016632.1-201ENST00000503994 196 ntBASIC1.17□□□□□ -2.22
RHBDD3Q9Y3P4 ATP5EP1-201ENST00000510257 156 ntBASIC1.17□□□□□ -2.22
RHBDD3Q9Y3P4 Vault.3-201ENST00000516676 95 ntBASIC1.17□□□□□ -2.22
RHBDD3Q9Y3P4 AP003072.2-201ENST00000527756 676 ntBASIC1.17□□□□□ -2.22
RHBDD3Q9Y3P4 RRN3P3-201ENST00000549207 578 ntBASIC1.17□□□□□ -2.22
RHBDD3Q9Y3P4 EIF4A1P12-201ENST00000551910 141 ntBASIC1.17□□□□□ -2.22
RHBDD3Q9Y3P4 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC1.17□□□□□ -2.22
RHBDD3Q9Y3P4 MIR3937-201ENST00000580135 106 ntBASIC1.17□□□□□ -2.22
RHBDD3Q9Y3P4 AC005771.1-201ENST00000585581 349 ntBASIC1.17□□□□□ -2.22
RHBDD3Q9Y3P4 RNU6-6P-201ENST00000606623 107 ntBASIC1.17□□□□□ -2.22
RHBDD3Q9Y3P4 AC091304.9-201ENST00000612091 226 ntBASIC1.17□□□□□ -2.22
RHBDD3Q9Y3P4 PCGEM1.1-201ENST00000613431 131 ntBASIC1.17□□□□□ -2.22
RHBDD3Q9Y3P4 AC083806.3-201ENST00000614016 455 ntBASIC1.17□□□□□ -2.22
RHBDD3Q9Y3P4 MIR7843-201ENST00000622274 79 ntBASIC1.17□□□□□ -2.22
RHBDD3Q9Y3P4 AL159152.1-201ENST00000635019 2587 ntBASIC1.17□□□□□ -2.22
RHBDD3Q9Y3P4 ZNF72P-201ENST00000425869 1908 ntBASIC1.17□□□□□ -2.22
RHBDD3Q9Y3P4 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
RHBDD3Q9Y3P4 SNORA63D-201ENST00000364359 132 ntBASIC1.16□□□□□ -2.22
RHBDD3Q9Y3P4 RNU6-336P-201ENST00000364891 107 ntBASIC1.16□□□□□ -2.22
RHBDD3Q9Y3P4 RNU6-203P-201ENST00000384038 104 ntBASIC1.16□□□□□ -2.22
RHBDD3Q9Y3P4 RNU6-550P-201ENST00000391057 101 ntBASIC1.16□□□□□ -2.22
RHBDD3Q9Y3P4 Y_RNA.598-201ENST00000410480 95 ntBASIC1.16□□□□□ -2.22
RHBDD3Q9Y3P4 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.16□□□□□ -2.22
RHBDD3Q9Y3P4 AL161935.2-201ENST00000414627 60 ntBASIC1.16□□□□□ -2.22
RHBDD3Q9Y3P4 AL356583.2-201ENST00000426536 280 ntBASIC1.16□□□□□ -2.22
RHBDD3Q9Y3P4 MTCO3P29-201ENST00000432119 779 ntBASIC1.16□□□□□ -2.22
RHBDD3Q9Y3P4 AC245047.4-201ENST00000433189 144 ntBASIC1.16□□□□□ -2.22
RHBDD3Q9Y3P4 AC073614.1-201ENST00000438690 650 ntBASIC1.16□□□□□ -2.22
RHBDD3Q9Y3P4 GAPDHP17-201ENST00000449858 1001 ntBASIC1.16□□□□□ -2.22
RHBDD3Q9Y3P4 OR2AQ1P-201ENST00000451972 200 ntBASIC1.16□□□□□ -2.22
RHBDD3Q9Y3P4 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC1.16□□□□□ -2.22
RHBDD3Q9Y3P4 SNORD11.1-201ENST00000459482 85 ntBASIC1.16□□□□□ -2.22
RHBDD3Q9Y3P4 RPL31P58-201ENST00000469001 379 ntBASIC1.16□□□□□ -2.22
RHBDD3Q9Y3P4 AC108210.2-201ENST00000503681 201 ntBASIC1.16□□□□□ -2.22
RHBDD3Q9Y3P4 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.16□□□□□ -2.22
RHBDD3Q9Y3P4 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.16□□□□□ -2.22
RHBDD3Q9Y3P4 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.16□□□□□ -2.22
RHBDD3Q9Y3P4 LRRC34P2-201ENST00000514850 553 ntBASIC1.16□□□□□ -2.22
RHBDD3Q9Y3P4 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.16□□□□□ -2.22
RHBDD3Q9Y3P4 RNU5F-4P-201ENST00000516581 114 ntBASIC1.16□□□□□ -2.22
RHBDD3Q9Y3P4 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.16□□□□□ -2.22
RHBDD3Q9Y3P4 AP003033.1-201ENST00000527244 415 ntBASIC1.16□□□□□ -2.22
RHBDD3Q9Y3P4 HSPE1P4-201ENST00000550617 308 ntBASIC1.16□□□□□ -2.22
RHBDD3Q9Y3P4 AC019288.1-201ENST00000557918 224 ntBASIC1.16□□□□□ -2.22
RHBDD3Q9Y3P4 AC015712.3-201ENST00000559380 164 ntBASIC1.16□□□□□ -2.22
RHBDD3Q9Y3P4 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.16□□□□□ -2.22
RHBDD3Q9Y3P4 AC015688.6-201ENST00000577737 104 ntBASIC1.16□□□□□ -2.22
RHBDD3Q9Y3P4 MIR3682-201ENST00000581338 84 ntBASIC1.16□□□□□ -2.22
RHBDD3Q9Y3P4 AC091805.2-201ENST00000603848 235 ntBASIC1.16□□□□□ -2.22
RHBDD3Q9Y3P4 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.16□□□□□ -2.22
RHBDD3Q9Y3P4 AC009159.2-201ENST00000617603 606 ntBASIC1.16□□□□□ -2.22
RHBDD3Q9Y3P4 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.16□□□□□ -2.22
RHBDD3Q9Y3P4 AL136221.1-201ENST00000621449 509 ntBASIC1.16□□□□□ -2.22
RHBDD3Q9Y3P4 ZNF209P-201ENST00000593450 2304 ntBASIC1.16□□□□□ -2.22
RHBDD3Q9Y3P4 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.16□□□□□ -2.22
RHBDD3Q9Y3P4 SNORD32A-201ENST00000364805 84 ntBASIC1.15□□□□□ -2.23
RHBDD3Q9Y3P4 SNORA70.7-201ENST00000384159 133 ntBASIC1.15□□□□□ -2.23
RHBDD3Q9Y3P4 U8.10-201ENST00000384260 133 ntBASIC1.15□□□□□ -2.23
RHBDD3Q9Y3P4 RNU6-692P-201ENST00000384496 107 ntBASIC1.15□□□□□ -2.23
RHBDD3Q9Y3P4 HIGD1AP15-201ENST00000416198 280 ntBASIC1.15□□□□□ -2.23
RHBDD3Q9Y3P4 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.15□□□□□ -2.23
RHBDD3Q9Y3P4 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.15□□□□□ -2.23
RHBDD3Q9Y3P4 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.15□□□□□ -2.23
RHBDD3Q9Y3P4 RPL23AP95-201ENST00000426806 265 ntBASIC1.15□□□□□ -2.23
RHBDD3Q9Y3P4 MTND5P25-201ENST00000430499 799 ntBASIC1.15□□□□□ -2.23
RHBDD3Q9Y3P4 AC007547.1-201ENST00000462177 490 ntBASIC1.15□□□□□ -2.23
RHBDD3Q9Y3P4 TOMM22P6-201ENST00000465035 409 ntBASIC1.15□□□□□ -2.23
RHBDD3Q9Y3P4 SNRPGP7-201ENST00000469016 106 ntBASIC1.15□□□□□ -2.23
RHBDD3Q9Y3P4 SNORA31.16-201ENST00000516773 139 ntBASIC1.15□□□□□ -2.23
RHBDD3Q9Y3P4 RNU1-92P-201ENST00000517017 135 ntBASIC1.15□□□□□ -2.23
RHBDD3Q9Y3P4 RNA5SP437-201ENST00000517249 129 ntBASIC1.15□□□□□ -2.23
RHBDD3Q9Y3P4 AL161670.1-201ENST00000554348 137 ntBASIC1.15□□□□□ -2.23
RHBDD3Q9Y3P4 DNAJC19P9-201ENST00000555084 351 ntBASIC1.15□□□□□ -2.23
RHBDD3Q9Y3P4 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.15□□□□□ -2.23
RHBDD3Q9Y3P4 AP005136.1-201ENST00000579765 429 ntBASIC1.15□□□□□ -2.23
RHBDD3Q9Y3P4 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.15□□□□□ -2.23
RHBDD3Q9Y3P4 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.15□□□□□ -2.23
RHBDD3Q9Y3P4 AL133173.2-201ENST00000614270 90 ntBASIC1.15□□□□□ -2.23
RHBDD3Q9Y3P4 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.15□□□□□ -2.23
RHBDD3Q9Y3P4 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.14□□□□□ -2.23
RHBDD3Q9Y3P4 RNU6-715P-201ENST00000365204 103 ntBASIC1.14□□□□□ -2.23
RHBDD3Q9Y3P4 RNU6-1026P-201ENST00000384465 108 ntBASIC1.14□□□□□ -2.23
RHBDD3Q9Y3P4 MRPL35P1-201ENST00000404272 572 ntBASIC1.14□□□□□ -2.23
RHBDD3Q9Y3P4 RNU2-41P-201ENST00000410991 178 ntBASIC1.14□□□□□ -2.23
RHBDD3Q9Y3P4 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.14□□□□□ -2.23
RHBDD3Q9Y3P4 AC099677.2-201ENST00000436385 175 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 155.6 ms