Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 VN1R107P-201ENST00000601784 209 ntBASIC1.65□□□□□ -2.15
CTNNA3Q9UI47 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.65□□□□□ -2.15
CTNNA3Q9UI47 AC091304.6-201ENST00000619761 202 ntBASIC1.65□□□□□ -2.15
CTNNA3Q9UI47 MIR1248-201ENST00000629190 106 ntBASIC1.65□□□□□ -2.15
CTNNA3Q9UI47 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.64□□□□□ -2.15
CTNNA3Q9UI47 AC245060.5-201ENST00000610778 3293 ntBASIC1.64□□□□□ -2.15
CTNNA3Q9UI47 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
CTNNA3Q9UI47 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
CTNNA3Q9UI47 RNU4-21P-201ENST00000362802 126 ntBASIC1.64□□□□□ -2.15
CTNNA3Q9UI47 RNU6-439P-201ENST00000384188 106 ntBASIC1.64□□□□□ -2.15
CTNNA3Q9UI47 Y_RNA.560-201ENST00000384689 102 ntBASIC1.64□□□□□ -2.15
CTNNA3Q9UI47 VN1R108P-201ENST00000431580 830 ntBASIC1.64□□□□□ -2.15
CTNNA3Q9UI47 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.64□□□□□ -2.15
CTNNA3Q9UI47 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.64□□□□□ -2.15
CTNNA3Q9UI47 GAPDHP17-201ENST00000449858 1001 ntBASIC1.64□□□□□ -2.15
CTNNA3Q9UI47 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.64□□□□□ -2.15
CTNNA3Q9UI47 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.64□□□□□ -2.15
CTNNA3Q9UI47 RNU7-125P-201ENST00000458760 62 ntBASIC1.64□□□□□ -2.15
CTNNA3Q9UI47 AC005908.1-201ENST00000468701 347 ntBASIC1.64□□□□□ -2.15
CTNNA3Q9UI47 AC022447.4-201ENST00000504053 364 ntBASIC1.64□□□□□ -2.15
CTNNA3Q9UI47 AC104806.1-201ENST00000508720 308 ntBASIC1.64□□□□□ -2.15
CTNNA3Q9UI47 AC074344.1-201ENST00000512823 224 ntBASIC1.64□□□□□ -2.15
CTNNA3Q9UI47 LRRC34P2-201ENST00000514850 553 ntBASIC1.64□□□□□ -2.15
CTNNA3Q9UI47 RNU6-1220P-201ENST00000517126 108 ntBASIC1.64□□□□□ -2.15
CTNNA3Q9UI47 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.64□□□□□ -2.15
CTNNA3Q9UI47 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.64□□□□□ -2.15
CTNNA3Q9UI47 AP005136.1-201ENST00000579765 429 ntBASIC1.64□□□□□ -2.15
CTNNA3Q9UI47 AC091135.1-201ENST00000585943 307 ntBASIC1.64□□□□□ -2.15
CTNNA3Q9UI47 AC123912.5-201ENST00000605470 343 ntBASIC1.64□□□□□ -2.15
CTNNA3Q9UI47 AP000654.2-201ENST00000605633 586 ntBASIC1.64□□□□□ -2.15
CTNNA3Q9UI47 AL603755.1-201ENST00000619504 163 ntBASIC1.64□□□□□ -2.15
CTNNA3Q9UI47 AC011155.2-201ENST00000623202 216 ntBASIC1.64□□□□□ -2.15
CTNNA3Q9UI47 AC091895.1-201ENST00000624494 256 ntBASIC1.64□□□□□ -2.15
CTNNA3Q9UI47 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.64□□□□□ -2.15
CTNNA3Q9UI47 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.63□□□□□ -2.15
CTNNA3Q9UI47 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CTNNA3Q9UI47 SNORA62.1-201ENST00000364287 154 ntBASIC1.63□□□□□ -2.15
CTNNA3Q9UI47 RNU5E-7P-201ENST00000365290 117 ntBASIC1.63□□□□□ -2.15
CTNNA3Q9UI47 Y_RNA.367-201ENST00000365544 101 ntBASIC1.63□□□□□ -2.15
CTNNA3Q9UI47 RNU6-45P-201ENST00000384471 107 ntBASIC1.63□□□□□ -2.15
CTNNA3Q9UI47 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.63□□□□□ -2.15
CTNNA3Q9UI47 MTND2P9-201ENST00000422293 931 ntBASIC1.63□□□□□ -2.15
CTNNA3Q9UI47 snoU13.9-201ENST00000458927 103 ntBASIC1.63□□□□□ -2.15
CTNNA3Q9UI47 RNU6-333P-201ENST00000459117 107 ntBASIC1.63□□□□□ -2.15
CTNNA3Q9UI47 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.63□□□□□ -2.15
CTNNA3Q9UI47 AC025465.3-201ENST00000510570 311 ntBASIC1.63□□□□□ -2.15
CTNNA3Q9UI47 MIR4422-201ENST00000581938 83 ntBASIC1.63□□□□□ -2.15
CTNNA3Q9UI47 AC136443.5-201ENST00000603741 370 ntBASIC1.63□□□□□ -2.15
CTNNA3Q9UI47 MIR6078-201ENST00000611069 100 ntBASIC1.63□□□□□ -2.15
CTNNA3Q9UI47 AF246928.1-201ENST00000623768 87 ntBASIC1.63□□□□□ -2.15
CTNNA3Q9UI47 AC008993.2-201ENST00000631744 806 ntBASIC1.63□□□□□ -2.15
CTNNA3Q9UI47 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CTNNA3Q9UI47 RNU6-1285P-201ENST00000363480 105 ntBASIC1.62□□□□□ -2.15
CTNNA3Q9UI47 RNA5SP493-201ENST00000364115 91 ntBASIC1.62□□□□□ -2.15
CTNNA3Q9UI47 RNU6-203P-201ENST00000384038 104 ntBASIC1.62□□□□□ -2.15
CTNNA3Q9UI47 RNU6-550P-201ENST00000391057 101 ntBASIC1.62□□□□□ -2.15
CTNNA3Q9UI47 RNU6-955P-201ENST00000410497 104 ntBASIC1.62□□□□□ -2.15
CTNNA3Q9UI47 MTCO3P46-201ENST00000425787 232 ntBASIC1.62□□□□□ -2.15
CTNNA3Q9UI47 AC013470.1-201ENST00000453438 462 ntBASIC1.62□□□□□ -2.15
CTNNA3Q9UI47 AC022364.2-201ENST00000457963 554 ntBASIC1.62□□□□□ -2.15
CTNNA3Q9UI47 RPS29P23-201ENST00000458635 123 ntBASIC1.62□□□□□ -2.15
CTNNA3Q9UI47 RNU7-182P-201ENST00000459009 62 ntBASIC1.62□□□□□ -2.15
CTNNA3Q9UI47 MTND3P25-201ENST00000509243 135 ntBASIC1.62□□□□□ -2.15
CTNNA3Q9UI47 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.62□□□□□ -2.15
CTNNA3Q9UI47 AC109479.2-201ENST00000517842 174 ntBASIC1.62□□□□□ -2.15
CTNNA3Q9UI47 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.62□□□□□ -2.15
CTNNA3Q9UI47 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.62□□□□□ -2.15
CTNNA3Q9UI47 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.62□□□□□ -2.15
CTNNA3Q9UI47 MIR3915-201ENST00000578518 97 ntBASIC1.62□□□□□ -2.15
CTNNA3Q9UI47 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.62□□□□□ -2.15
CTNNA3Q9UI47 MIR3941-201ENST00000582572 103 ntBASIC1.62□□□□□ -2.15
CTNNA3Q9UI47 AC245014.2-201ENST00000603689 287 ntBASIC1.62□□□□□ -2.15
CTNNA3Q9UI47 AL356157.2-201ENST00000605122 111 ntBASIC1.62□□□□□ -2.15
CTNNA3Q9UI47 AC018889.1-201ENST00000605372 397 ntBASIC1.62□□□□□ -2.15
CTNNA3Q9UI47 AC246785.4-201ENST00000605374 287 ntBASIC1.62□□□□□ -2.15
CTNNA3Q9UI47 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
CTNNA3Q9UI47 RMST_2.1-201ENST00000617263 136 ntBASIC1.62□□□□□ -2.15
CTNNA3Q9UI47 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.62□□□□□ -2.15
CTNNA3Q9UI47 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.61□□□□□ -2.15
CTNNA3Q9UI47 AL357139.1-201ENST00000407792 426 ntBASIC1.61□□□□□ -2.15
CTNNA3Q9UI47 RNU6-248P-201ENST00000410720 107 ntBASIC1.61□□□□□ -2.15
CTNNA3Q9UI47 RNU4-46P-201ENST00000410818 138 ntBASIC1.61□□□□□ -2.15
CTNNA3Q9UI47 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CTNNA3Q9UI47 AL591043.1-201ENST00000432461 424 ntBASIC1.61□□□□□ -2.15
CTNNA3Q9UI47 AC000111.3-201ENST00000433478 193 ntBASIC1.61□□□□□ -2.15
CTNNA3Q9UI47 AL596276.1-201ENST00000434465 418 ntBASIC1.61□□□□□ -2.15
CTNNA3Q9UI47 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.61□□□□□ -2.15
CTNNA3Q9UI47 MTCYBP1-201ENST00000454315 1119 ntBASIC1.61□□□□□ -2.15
CTNNA3Q9UI47 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.61□□□□□ -2.15
CTNNA3Q9UI47 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.61□□□□□ -2.15
CTNNA3Q9UI47 SNORA31.17-201ENST00000516953 127 ntBASIC1.61□□□□□ -2.15
CTNNA3Q9UI47 COPS8P3-201ENST00000526024 482 ntBASIC1.61□□□□□ -2.15
CTNNA3Q9UI47 AP005597.4-201ENST00000526762 229 ntBASIC1.61□□□□□ -2.15
CTNNA3Q9UI47 TRAV32-201ENST00000553993 340 ntBASIC1.61□□□□□ -2.15
CTNNA3Q9UI47 MTCO3P23-201ENST00000561363 289 ntBASIC1.61□□□□□ -2.15
CTNNA3Q9UI47 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.61□□□□□ -2.15
CTNNA3Q9UI47 PRR13P7-201ENST00000605538 430 ntBASIC1.61□□□□□ -2.15
CTNNA3Q9UI47 Z99289.3-201ENST00000605586 594 ntBASIC1.61□□□□□ -2.15
CTNNA3Q9UI47 AP001596.2-201ENST00000608410 312 ntBASIC1.61□□□□□ -2.15
CTNNA3Q9UI47 AC006566.1-201ENST00000608943 513 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms