Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 U3.9-201ENST00000363823 204 ntBASIC1.06□□□□□ -2.24
VAPAQ9P0L0 Y_RNA.255-201ENST00000364581 97 ntBASIC1.06□□□□□ -2.24
VAPAQ9P0L0 RNU4-91P-201ENST00000364778 135 ntBASIC1.06□□□□□ -2.24
VAPAQ9P0L0 RNU6-1303P-201ENST00000364841 107 ntBASIC1.06□□□□□ -2.24
VAPAQ9P0L0 MIR1261-201ENST00000408659 82 ntBASIC1.06□□□□□ -2.24
VAPAQ9P0L0 RNU4-62P-201ENST00000410125 130 ntBASIC1.06□□□□□ -2.24
VAPAQ9P0L0 RNU2-8P-201ENST00000410727 190 ntBASIC1.06□□□□□ -2.24
VAPAQ9P0L0 RPL31P3-201ENST00000458430 332 ntBASIC1.06□□□□□ -2.24
VAPAQ9P0L0 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.06□□□□□ -2.24
VAPAQ9P0L0 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.06□□□□□ -2.24
VAPAQ9P0L0 AC079140.3-201ENST00000511111 550 ntBASIC1.06□□□□□ -2.24
VAPAQ9P0L0 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.06□□□□□ -2.24
VAPAQ9P0L0 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.06□□□□□ -2.24
VAPAQ9P0L0 RNU6-311P-201ENST00000516224 102 ntBASIC1.06□□□□□ -2.24
VAPAQ9P0L0 RNU5F-4P-201ENST00000516581 114 ntBASIC1.06□□□□□ -2.24
VAPAQ9P0L0 RNU6-1098P-201ENST00000516772 96 ntBASIC1.06□□□□□ -2.24
VAPAQ9P0L0 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
VAPAQ9P0L0 AC022878.1-201ENST00000530684 149 ntBASIC1.06□□□□□ -2.24
VAPAQ9P0L0 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.06□□□□□ -2.24
VAPAQ9P0L0 AC021231.3-201ENST00000558497 370 ntBASIC1.06□□□□□ -2.24
VAPAQ9P0L0 AC009977.1-201ENST00000586015 570 ntBASIC1.06□□□□□ -2.24
VAPAQ9P0L0 BNIP3P16-201ENST00000589779 534 ntBASIC1.06□□□□□ -2.24
VAPAQ9P0L0 AL355802.3-201ENST00000607571 545 ntBASIC1.06□□□□□ -2.24
VAPAQ9P0L0 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.06□□□□□ -2.24
VAPAQ9P0L0 AL512598.1-201ENST00000610158 273 ntBASIC1.06□□□□□ -2.24
VAPAQ9P0L0 AC138649.3-201ENST00000622154 254 ntBASIC1.06□□□□□ -2.24
VAPAQ9P0L0 AC099654.13-201ENST00000639774 207 ntBASIC1.06□□□□□ -2.24
VAPAQ9P0L0 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
VAPAQ9P0L0 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
VAPAQ9P0L0 MTND4P14-201ENST00000435799 1354 ntBASIC1.06□□□□□ -2.24
VAPAQ9P0L0 RNA5SP327-201ENST00000362494 101 ntBASIC1.05□□□□□ -2.24
VAPAQ9P0L0 RNU6-1287P-201ENST00000362914 107 ntBASIC1.05□□□□□ -2.24
VAPAQ9P0L0 RNU6-715P-201ENST00000365204 103 ntBASIC1.05□□□□□ -2.24
VAPAQ9P0L0 RNU6-169P-201ENST00000365336 107 ntBASIC1.05□□□□□ -2.24
VAPAQ9P0L0 RNU6-1060P-201ENST00000384664 107 ntBASIC1.05□□□□□ -2.24
VAPAQ9P0L0 RNU6-331P-201ENST00000384724 107 ntBASIC1.05□□□□□ -2.24
VAPAQ9P0L0 MIR618-201ENST00000385287 98 ntBASIC1.05□□□□□ -2.24
VAPAQ9P0L0 RNU6-550P-201ENST00000391057 101 ntBASIC1.05□□□□□ -2.24
VAPAQ9P0L0 RNA5SP201-201ENST00000410316 124 ntBASIC1.05□□□□□ -2.24
VAPAQ9P0L0 AL161935.2-201ENST00000414627 60 ntBASIC1.05□□□□□ -2.24
VAPAQ9P0L0 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.05□□□□□ -2.24
VAPAQ9P0L0 AC104850.1-201ENST00000435940 476 ntBASIC1.05□□□□□ -2.24
VAPAQ9P0L0 RNU7-95P-201ENST00000459222 64 ntBASIC1.05□□□□□ -2.24
VAPAQ9P0L0 HMGN2P9-201ENST00000476875 229 ntBASIC1.05□□□□□ -2.24
VAPAQ9P0L0 RN7SL429P-201ENST00000479090 223 ntBASIC1.05□□□□□ -2.24
VAPAQ9P0L0 RN7SL489P-201ENST00000486185 223 ntBASIC1.05□□□□□ -2.24
VAPAQ9P0L0 RN7SL327P-201ENST00000488659 223 ntBASIC1.05□□□□□ -2.24
VAPAQ9P0L0 AL133373.1-201ENST00000497098 94 ntBASIC1.05□□□□□ -2.24
VAPAQ9P0L0 RNA5SP481-201ENST00000516814 122 ntBASIC1.05□□□□□ -2.24
VAPAQ9P0L0 AC023050.3-201ENST00000541142 333 ntBASIC1.05□□□□□ -2.24
VAPAQ9P0L0 CYP3A52P-201ENST00000563326 91 ntBASIC1.05□□□□□ -2.24
VAPAQ9P0L0 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.05□□□□□ -2.24
VAPAQ9P0L0 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.05□□□□□ -2.24
VAPAQ9P0L0 AP003465.2-201ENST00000602571 373 ntBASIC1.05□□□□□ -2.24
VAPAQ9P0L0 MIR3976-201ENST00000606807 139 ntBASIC1.05□□□□□ -2.24
VAPAQ9P0L0 AL133173.2-201ENST00000614270 90 ntBASIC1.05□□□□□ -2.24
VAPAQ9P0L0 RN7SL853P-201ENST00000617250 223 ntBASIC1.05□□□□□ -2.24
VAPAQ9P0L0 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
VAPAQ9P0L0 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
VAPAQ9P0L0 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.04□□□□□ -2.24
VAPAQ9P0L0 MTND5P35-201ENST00000557537 1720 ntBASIC1.04□□□□□ -2.24
VAPAQ9P0L0 RNU6-500P-201ENST00000362349 107 ntBASIC1.04□□□□□ -2.24
VAPAQ9P0L0 U3.4-201ENST00000363352 213 ntBASIC1.04□□□□□ -2.24
VAPAQ9P0L0 RNU6-1019P-201ENST00000364424 107 ntBASIC1.04□□□□□ -2.24
VAPAQ9P0L0 MIR513A1-201ENST00000385138 129 ntBASIC1.04□□□□□ -2.24
VAPAQ9P0L0 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.04□□□□□ -2.24
VAPAQ9P0L0 RPS29P28-201ENST00000446439 141 ntBASIC1.04□□□□□ -2.24
VAPAQ9P0L0 ZNF114P1-201ENST00000453500 292 ntBASIC1.04□□□□□ -2.24
VAPAQ9P0L0 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.04□□□□□ -2.24
VAPAQ9P0L0 OR2A41P-201ENST00000473586 105 ntBASIC1.04□□□□□ -2.24
VAPAQ9P0L0 AC093852.1-201ENST00000503587 266 ntBASIC1.04□□□□□ -2.24
VAPAQ9P0L0 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.04□□□□□ -2.24
VAPAQ9P0L0 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.04□□□□□ -2.24
VAPAQ9P0L0 AC109479.2-201ENST00000517842 174 ntBASIC1.04□□□□□ -2.24
VAPAQ9P0L0 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.04□□□□□ -2.24
VAPAQ9P0L0 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.04□□□□□ -2.24
VAPAQ9P0L0 AC015688.6-201ENST00000577737 104 ntBASIC1.04□□□□□ -2.24
VAPAQ9P0L0 AP005136.1-201ENST00000579765 429 ntBASIC1.04□□□□□ -2.24
VAPAQ9P0L0 BNIP3P8-201ENST00000597863 560 ntBASIC1.04□□□□□ -2.24
VAPAQ9P0L0 AC078795.3-201ENST00000602913 472 ntBASIC1.04□□□□□ -2.24
VAPAQ9P0L0 PCGEM1.1-201ENST00000613431 131 ntBASIC1.04□□□□□ -2.24
VAPAQ9P0L0 AC136475.10-201ENST00000620253 385 ntBASIC1.04□□□□□ -2.24
VAPAQ9P0L0 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.04□□□□□ -2.24
VAPAQ9P0L0 SNORA7.1-201ENST00000363750 139 ntBASIC1.03□□□□□ -2.24
VAPAQ9P0L0 RNU1-96P-201ENST00000364163 162 ntBASIC1.03□□□□□ -2.24
VAPAQ9P0L0 SNORD31B-201ENST00000364977 69 ntBASIC1.03□□□□□ -2.24
VAPAQ9P0L0 SNORA22-201ENST00000383907 134 ntBASIC1.03□□□□□ -2.24
VAPAQ9P0L0 RNU6-1065P-201ENST00000384513 106 ntBASIC1.03□□□□□ -2.24
VAPAQ9P0L0 SNORA22C-201ENST00000384614 134 ntBASIC1.03□□□□□ -2.24
VAPAQ9P0L0 HIGD1AP15-201ENST00000416198 280 ntBASIC1.03□□□□□ -2.24
VAPAQ9P0L0 ARL5AP1-201ENST00000418991 388 ntBASIC1.03□□□□□ -2.24
VAPAQ9P0L0 MRPL35P3-201ENST00000421557 364 ntBASIC1.03□□□□□ -2.24
VAPAQ9P0L0 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.03□□□□□ -2.24
VAPAQ9P0L0 AC078809.1-201ENST00000427601 140 ntBASIC1.03□□□□□ -2.24
VAPAQ9P0L0 AL121890.1-201ENST00000435457 205 ntBASIC1.03□□□□□ -2.24
VAPAQ9P0L0 EPS15P1-201ENST00000448836 336 ntBASIC1.03□□□□□ -2.24
VAPAQ9P0L0 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.03□□□□□ -2.24
VAPAQ9P0L0 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.03□□□□□ -2.24
VAPAQ9P0L0 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.03□□□□□ -2.24
VAPAQ9P0L0 RAP1BP2-201ENST00000478270 544 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms