Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.36□□□□□ -2.03
SIX2Q9NPC8 AC019159.1-201ENST00000605094 187 ntBASIC2.36□□□□□ -2.03
SIX2Q9NPC8 AC009229.3-201ENST00000608056 282 ntBASIC2.36□□□□□ -2.03
SIX2Q9NPC8 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.36□□□□□ -2.03
SIX2Q9NPC8 AC126177.8-201ENST00000618339 1015 ntBASIC2.36□□□□□ -2.03
SIX2Q9NPC8 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.36□□□□□ -2.03
SIX2Q9NPC8 AL669831.3-213ENST00000636676 183 ntBASIC2.36□□□□□ -2.03
SIX2Q9NPC8 AC241585.2-209ENST00000638217 143 ntBASIC2.36□□□□□ -2.03
SIX2Q9NPC8 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.36□□□□□ -2.03
SIX2Q9NPC8 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.36□□□□□ -2.03
SIX2Q9NPC8 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
SIX2Q9NPC8 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.35□□□□□ -2.03
SIX2Q9NPC8 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SIX2Q9NPC8 Y_RNA.404-201ENST00000383978 102 ntBASIC2.35□□□□□ -2.03
SIX2Q9NPC8 RNU6-1027P-201ENST00000383998 107 ntBASIC2.35□□□□□ -2.03
SIX2Q9NPC8 RNU6-842P-201ENST00000384269 107 ntBASIC2.35□□□□□ -2.03
SIX2Q9NPC8 RNU6-692P-201ENST00000384496 107 ntBASIC2.35□□□□□ -2.03
SIX2Q9NPC8 SNORA75.4-201ENST00000391278 119 ntBASIC2.35□□□□□ -2.03
SIX2Q9NPC8 AP000275.1-201ENST00000411943 390 ntBASIC2.35□□□□□ -2.03
SIX2Q9NPC8 MTND3P9-201ENST00000429526 346 ntBASIC2.35□□□□□ -2.03
SIX2Q9NPC8 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.35□□□□□ -2.03
SIX2Q9NPC8 AC236972.1-201ENST00000433225 199 ntBASIC2.35□□□□□ -2.03
SIX2Q9NPC8 RNU7-152P-201ENST00000458982 64 ntBASIC2.35□□□□□ -2.03
SIX2Q9NPC8 AC114801.2-201ENST00000503825 781 ntBASIC2.35□□□□□ -2.03
SIX2Q9NPC8 HMGN1P13-201ENST00000505795 138 ntBASIC2.35□□□□□ -2.03
SIX2Q9NPC8 RNU5B-3P-201ENST00000516601 115 ntBASIC2.35□□□□□ -2.03
SIX2Q9NPC8 SNORA31.15-201ENST00000516771 132 ntBASIC2.35□□□□□ -2.03
SIX2Q9NPC8 RNU6-1213P-201ENST00000517075 94 ntBASIC2.35□□□□□ -2.03
SIX2Q9NPC8 AC103810.1-201ENST00000579873 453 ntBASIC2.35□□□□□ -2.03
SIX2Q9NPC8 AC090897.2-201ENST00000581715 130 ntBASIC2.35□□□□□ -2.03
SIX2Q9NPC8 MIR5690-201ENST00000583739 73 ntBASIC2.35□□□□□ -2.03
SIX2Q9NPC8 AC078795.3-201ENST00000602913 472 ntBASIC2.35□□□□□ -2.03
SIX2Q9NPC8 AP001836.1-201ENST00000604675 523 ntBASIC2.35□□□□□ -2.03
SIX2Q9NPC8 AC018889.1-201ENST00000605372 397 ntBASIC2.35□□□□□ -2.03
SIX2Q9NPC8 AL133255.1-201ENST00000606374 441 ntBASIC2.35□□□□□ -2.03
SIX2Q9NPC8 MIR8076-201ENST00000611401 83 ntBASIC2.35□□□□□ -2.03
SIX2Q9NPC8 AC024581.2-201ENST00000619986 252 ntBASIC2.35□□□□□ -2.03
SIX2Q9NPC8 AC090574.1-201ENST00000623186 233 ntBASIC2.35□□□□□ -2.03
SIX2Q9NPC8 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SIX2Q9NPC8 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.35□□□□□ -2.03
SIX2Q9NPC8 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
SIX2Q9NPC8 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.34□□□□□ -2.03
SIX2Q9NPC8 RNU6-227P-201ENST00000362865 103 ntBASIC2.34□□□□□ -2.03
SIX2Q9NPC8 RNU6-596P-201ENST00000365395 98 ntBASIC2.34□□□□□ -2.03
SIX2Q9NPC8 Y_RNA.419-201ENST00000384041 102 ntBASIC2.34□□□□□ -2.03
SIX2Q9NPC8 Y_RNA.431-201ENST00000384086 102 ntBASIC2.34□□□□□ -2.03
SIX2Q9NPC8 RNU6-310P-201ENST00000384655 107 ntBASIC2.34□□□□□ -2.03
SIX2Q9NPC8 MIR521-1-201ENST00000384902 87 ntBASIC2.34□□□□□ -2.03
SIX2Q9NPC8 MIR147B-201ENST00000390185 80 ntBASIC2.34□□□□□ -2.03
SIX2Q9NPC8 MIR1289-1-201ENST00000408836 144 ntBASIC2.34□□□□□ -2.03
SIX2Q9NPC8 RNU6-174P-201ENST00000410406 106 ntBASIC2.34□□□□□ -2.03
SIX2Q9NPC8 Y_RNA.646-201ENST00000410980 101 ntBASIC2.34□□□□□ -2.03
SIX2Q9NPC8 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.34□□□□□ -2.03
SIX2Q9NPC8 Z82205.1-201ENST00000428456 297 ntBASIC2.34□□□□□ -2.03
SIX2Q9NPC8 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.34□□□□□ -2.03
SIX2Q9NPC8 OSTCP8-201ENST00000445117 448 ntBASIC2.34□□□□□ -2.03
SIX2Q9NPC8 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.34□□□□□ -2.03
SIX2Q9NPC8 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.34□□□□□ -2.03
SIX2Q9NPC8 AC012308.1-201ENST00000451232 178 ntBASIC2.34□□□□□ -2.03
SIX2Q9NPC8 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.34□□□□□ -2.03
SIX2Q9NPC8 Y_RNA.653-201ENST00000459091 95 ntBASIC2.34□□□□□ -2.03
SIX2Q9NPC8 RPL7P42-201ENST00000481005 679 ntBASIC2.34□□□□□ -2.03
SIX2Q9NPC8 ACA59.1-201ENST00000515966 143 ntBASIC2.34□□□□□ -2.03
SIX2Q9NPC8 RNA5SP200-201ENST00000516360 103 ntBASIC2.34□□□□□ -2.03
SIX2Q9NPC8 AC109446.1-201ENST00000566172 220 ntBASIC2.34□□□□□ -2.03
SIX2Q9NPC8 AC084781.2-201ENST00000615568 161 ntBASIC2.34□□□□□ -2.03
SIX2Q9NPC8 UCA1.1-201ENST00000620952 75 ntBASIC2.34□□□□□ -2.03
SIX2Q9NPC8 AL160413.1-201ENST00000622780 310 ntBASIC2.34□□□□□ -2.03
SIX2Q9NPC8 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
SIX2Q9NPC8 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.04
SIX2Q9NPC8 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
SIX2Q9NPC8 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.33□□□□□ -2.04
SIX2Q9NPC8 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.33□□□□□ -2.04
SIX2Q9NPC8 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.33□□□□□ -2.04
SIX2Q9NPC8 RNU4-76P-201ENST00000364509 141 ntBASIC2.33□□□□□ -2.04
SIX2Q9NPC8 RNA5SP390-201ENST00000410191 113 ntBASIC2.33□□□□□ -2.04
SIX2Q9NPC8 RNU6-1245P-201ENST00000411130 106 ntBASIC2.33□□□□□ -2.04
SIX2Q9NPC8 AL358075.3-201ENST00000426289 226 ntBASIC2.33□□□□□ -2.04
SIX2Q9NPC8 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.33□□□□□ -2.04
SIX2Q9NPC8 MTCO3P10-201ENST00000455912 772 ntBASIC2.33□□□□□ -2.04
SIX2Q9NPC8 ELOCP24-201ENST00000456370 334 ntBASIC2.33□□□□□ -2.04
SIX2Q9NPC8 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.33□□□□□ -2.04
SIX2Q9NPC8 AL441985.1-201ENST00000457727 251 ntBASIC2.33□□□□□ -2.04
SIX2Q9NPC8 MRPS36P2-201ENST00000512569 299 ntBASIC2.33□□□□□ -2.04
SIX2Q9NPC8 RNU6-56P-201ENST00000516986 93 ntBASIC2.33□□□□□ -2.04
SIX2Q9NPC8 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.33□□□□□ -2.04
SIX2Q9NPC8 RNU6-91P-201ENST00000607774 107 ntBASIC2.33□□□□□ -2.04
SIX2Q9NPC8 PISRT1.1-201ENST00000616930 107 ntBASIC2.33□□□□□ -2.04
SIX2Q9NPC8 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.33□□□□□ -2.04
SIX2Q9NPC8 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.33□□□□□ -2.04
SIX2Q9NPC8 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.33□□□□□ -2.04
SIX2Q9NPC8 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.32□□□□□ -2.04
SIX2Q9NPC8 MIRLET7G-201ENST00000362280 84 ntBASIC2.32□□□□□ -2.04
SIX2Q9NPC8 RNU6-525P-201ENST00000363685 104 ntBASIC2.32□□□□□ -2.04
SIX2Q9NPC8 SNORD32A-201ENST00000364805 84 ntBASIC2.32□□□□□ -2.04
SIX2Q9NPC8 Y_RNA.315-201ENST00000365117 102 ntBASIC2.32□□□□□ -2.04
SIX2Q9NPC8 RPL21P75-201ENST00000396599 483 ntBASIC2.32□□□□□ -2.04
SIX2Q9NPC8 RPL21P28-201ENST00000401418 483 ntBASIC2.32□□□□□ -2.04
SIX2Q9NPC8 AL591034.2-201ENST00000402839 359 ntBASIC2.32□□□□□ -2.04
SIX2Q9NPC8 AL133475.1-201ENST00000404414 305 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms