Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 AP000787.2-201ENST00000604432 568 ntBASIC2.82□□□□□ -1.96
CDT1Q9H211 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.82□□□□□ -1.96
CDT1Q9H211 AL161431.1-201ENST00000618966 4205 ntBASIC2.82□□□□□ -1.96
CDT1Q9H211 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.82□□□□□ -1.96
CDT1Q9H211 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
CDT1Q9H211 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.82□□□□□ -1.96
CDT1Q9H211 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CDT1Q9H211 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CDT1Q9H211 RNU6-639P-201ENST00000384074 107 ntBASIC2.81□□□□□ -1.96
CDT1Q9H211 RNU6-1032P-201ENST00000384100 107 ntBASIC2.81□□□□□ -1.96
CDT1Q9H211 SNORD88.1-201ENST00000408684 91 ntBASIC2.81□□□□□ -1.96
CDT1Q9H211 RNU6-325P-201ENST00000411132 105 ntBASIC2.81□□□□□ -1.96
CDT1Q9H211 OOSP1P1-201ENST00000423265 274 ntBASIC2.81□□□□□ -1.96
CDT1Q9H211 BX276092.3-201ENST00000424182 230 ntBASIC2.81□□□□□ -1.96
CDT1Q9H211 AL358176.2-201ENST00000425769 204 ntBASIC2.81□□□□□ -1.96
CDT1Q9H211 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.81□□□□□ -1.96
CDT1Q9H211 AC013470.1-201ENST00000453438 462 ntBASIC2.81□□□□□ -1.96
CDT1Q9H211 MTATP8P1-201ENST00000467115 207 ntBASIC2.81□□□□□ -1.96
CDT1Q9H211 FO393415.2-201ENST00000480085 343 ntBASIC2.81□□□□□ -1.96
CDT1Q9H211 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.81□□□□□ -1.96
CDT1Q9H211 RNU6-976P-201ENST00000516086 111 ntBASIC2.81□□□□□ -1.96
CDT1Q9H211 RNA5SP148-201ENST00000516527 94 ntBASIC2.81□□□□□ -1.96
CDT1Q9H211 ACA59.2-201ENST00000517061 156 ntBASIC2.81□□□□□ -1.96
CDT1Q9H211 RNU6-988P-201ENST00000519081 107 ntBASIC2.81□□□□□ -1.96
CDT1Q9H211 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.81□□□□□ -1.96
CDT1Q9H211 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.81□□□□□ -1.96
CDT1Q9H211 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.81□□□□□ -1.96
CDT1Q9H211 MIR4435-1-201ENST00000582552 80 ntBASIC2.81□□□□□ -1.96
CDT1Q9H211 BNIP3P16-201ENST00000589779 534 ntBASIC2.81□□□□□ -1.96
CDT1Q9H211 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.81□□□□□ -1.96
CDT1Q9H211 AC010620.2-201ENST00000600135 313 ntBASIC2.81□□□□□ -1.96
CDT1Q9H211 AC104695.3-201ENST00000604052 296 ntBASIC2.81□□□□□ -1.96
CDT1Q9H211 AC091152.3-201ENST00000604227 325 ntBASIC2.81□□□□□ -1.96
CDT1Q9H211 MIR3976-201ENST00000606807 139 ntBASIC2.81□□□□□ -1.96
CDT1Q9H211 AC005014.2-201ENST00000607795 599 ntBASIC2.81□□□□□ -1.96
CDT1Q9H211 AC008121.3-201ENST00000618726 433 ntBASIC2.81□□□□□ -1.96
CDT1Q9H211 AC097372.5-201ENST00000623665 376 ntBASIC2.81□□□□□ -1.96
CDT1Q9H211 AC010889.1-201ENST00000566193 2666 ntBASIC2.81□□□□□ -1.96
CDT1Q9H211 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.81□□□□□ -1.96
CDT1Q9H211 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CDT1Q9H211 Y_RNA.252-201ENST00000364556 101 ntBASIC2.8□□□□□ -1.96
CDT1Q9H211 SNORD116-20-201ENST00000384529 92 ntBASIC2.8□□□□□ -1.96
CDT1Q9H211 Y_RNA.527-201ENST00000384573 102 ntBASIC2.8□□□□□ -1.96
CDT1Q9H211 RNU6-750P-201ENST00000390946 107 ntBASIC2.8□□□□□ -1.96
CDT1Q9H211 MRPL42P3-201ENST00000401492 326 ntBASIC2.8□□□□□ -1.96
CDT1Q9H211 AC008267.5-201ENST00000424928 265 ntBASIC2.8□□□□□ -1.96
CDT1Q9H211 UBBP3-201ENST00000445497 241 ntBASIC2.8□□□□□ -1.96
CDT1Q9H211 CHEK2P4-201ENST00000450340 246 ntBASIC2.8□□□□□ -1.96
CDT1Q9H211 PCMTD1P1-201ENST00000455560 355 ntBASIC2.8□□□□□ -1.96
CDT1Q9H211 AC006026.2-201ENST00000457376 180 ntBASIC2.8□□□□□ -1.96
CDT1Q9H211 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.8□□□□□ -1.96
CDT1Q9H211 RN7SL297P-201ENST00000483161 293 ntBASIC2.8□□□□□ -1.96
CDT1Q9H211 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.8□□□□□ -1.96
CDT1Q9H211 AK3P2-201ENST00000507976 429 ntBASIC2.8□□□□□ -1.96
CDT1Q9H211 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.8□□□□□ -1.96
CDT1Q9H211 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.8□□□□□ -1.96
CDT1Q9H211 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.8□□□□□ -1.96
CDT1Q9H211 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.8□□□□□ -1.96
CDT1Q9H211 RNA5SP320-201ENST00000516263 124 ntBASIC2.8□□□□□ -1.96
CDT1Q9H211 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.8□□□□□ -1.96
CDT1Q9H211 CPDP1-201ENST00000579660 283 ntBASIC2.8□□□□□ -1.96
CDT1Q9H211 AL355877.2-201ENST00000603670 358 ntBASIC2.8□□□□□ -1.96
CDT1Q9H211 AC019159.1-201ENST00000605094 187 ntBASIC2.8□□□□□ -1.96
CDT1Q9H211 AC006157.1-201ENST00000611750 366 ntBASIC2.8□□□□□ -1.96
CDT1Q9H211 AC083806.3-201ENST00000614016 455 ntBASIC2.8□□□□□ -1.96
CDT1Q9H211 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.8□□□□□ -1.96
CDT1Q9H211 AC243829.7-201ENST00000633081 225 ntBASIC2.8□□□□□ -1.96
CDT1Q9H211 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
CDT1Q9H211 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CDT1Q9H211 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.8□□□□□ -1.96
CDT1Q9H211 MTND5P16-201ENST00000460269 1703 ntBASIC2.79□□□□□ -1.96
CDT1Q9H211 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CDT1Q9H211 RNU6-527P-201ENST00000363425 104 ntBASIC2.79□□□□□ -1.96
CDT1Q9H211 SNORD56.5-201ENST00000364281 72 ntBASIC2.79□□□□□ -1.96
CDT1Q9H211 RNU6-336P-201ENST00000364891 107 ntBASIC2.79□□□□□ -1.96
CDT1Q9H211 RNU6-1106P-201ENST00000390845 107 ntBASIC2.79□□□□□ -1.96
CDT1Q9H211 RNU6-985P-201ENST00000410182 104 ntBASIC2.79□□□□□ -1.96
CDT1Q9H211 RNU6-174P-201ENST00000410406 106 ntBASIC2.79□□□□□ -1.96
CDT1Q9H211 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.79□□□□□ -1.96
CDT1Q9H211 USMG5P1-201ENST00000425964 177 ntBASIC2.79□□□□□ -1.96
CDT1Q9H211 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.79□□□□□ -1.96
CDT1Q9H211 AL133396.1-201ENST00000432048 687 ntBASIC2.79□□□□□ -1.96
CDT1Q9H211 RNU6-1037P-201ENST00000459571 107 ntBASIC2.79□□□□□ -1.96
CDT1Q9H211 AC008571.1-201ENST00000467232 300 ntBASIC2.79□□□□□ -1.96
CDT1Q9H211 RPL23AP49-201ENST00000492925 468 ntBASIC2.79□□□□□ -1.96
CDT1Q9H211 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.79□□□□□ -1.96
CDT1Q9H211 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.79□□□□□ -1.96
CDT1Q9H211 Y_RNA.720-201ENST00000517166 92 ntBASIC2.79□□□□□ -1.96
CDT1Q9H211 CR383656.8-201ENST00000549046 145 ntBASIC2.79□□□□□ -1.96
CDT1Q9H211 AC078899.3-201ENST00000599065 212 ntBASIC2.79□□□□□ -1.96
CDT1Q9H211 AC009314.1-201ENST00000603871 304 ntBASIC2.79□□□□□ -1.96
CDT1Q9H211 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
CDT1Q9H211 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CDT1Q9H211 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
CDT1Q9H211 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
CDT1Q9H211 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.78□□□□□ -1.96
CDT1Q9H211 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
CDT1Q9H211 ZNF72P-201ENST00000425869 1908 ntBASIC2.78□□□□□ -1.96
CDT1Q9H211 AC091812.1-201ENST00000432235 1948 ntBASIC2.78□□□□□ -1.96
CDT1Q9H211 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 149.1 ms