Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC022695.1-201ENST00000522089 237 ntBASIC3.61□□□□□ -1.83
TRIM55Q9BYV6 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.61□□□□□ -1.83
TRIM55Q9BYV6 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.61□□□□□ -1.83
TRIM55Q9BYV6 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.61□□□□□ -1.83
TRIM55Q9BYV6 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.61□□□□□ -1.83
TRIM55Q9BYV6 AL162713.1-201ENST00000604480 262 ntBASIC3.61□□□□□ -1.83
TRIM55Q9BYV6 PCGEM1.1-201ENST00000613431 131 ntBASIC3.61□□□□□ -1.83
TRIM55Q9BYV6 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM55Q9BYV6 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.61□□□□□ -1.83
TRIM55Q9BYV6 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM55Q9BYV6 AC000403.1-201ENST00000613696 3585 ntBASIC3.61□□□□□ -1.83
TRIM55Q9BYV6 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM55Q9BYV6 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.61□□□□□ -1.83
TRIM55Q9BYV6 MAPK10-362ENST00000641864 4484 ntBASIC3.6□□□□□ -1.83
TRIM55Q9BYV6 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TRIM55Q9BYV6 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.6□□□□□ -1.83
TRIM55Q9BYV6 Y_RNA.152-201ENST00000363578 100 ntBASIC3.6□□□□□ -1.83
TRIM55Q9BYV6 Y_RNA.210-201ENST00000364161 110 ntBASIC3.6□□□□□ -1.83
TRIM55Q9BYV6 RNU6-879P-201ENST00000364328 108 ntBASIC3.6□□□□□ -1.83
TRIM55Q9BYV6 SNORA68.1-201ENST00000364537 132 ntBASIC3.6□□□□□ -1.83
TRIM55Q9BYV6 RNU6-26P-201ENST00000383985 107 ntBASIC3.6□□□□□ -1.83
TRIM55Q9BYV6 MIR1289-1-201ENST00000408836 144 ntBASIC3.6□□□□□ -1.83
TRIM55Q9BYV6 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.6□□□□□ -1.83
TRIM55Q9BYV6 RPS29P4-201ENST00000414733 161 ntBASIC3.6□□□□□ -1.83
TRIM55Q9BYV6 MICF-203ENST00000432679 129 ntBASIC3.6□□□□□ -1.83
TRIM55Q9BYV6 AL133162.1-201ENST00000463228 453 ntBASIC3.6□□□□□ -1.83
TRIM55Q9BYV6 AC007215.1-201ENST00000464893 276 ntBASIC3.6□□□□□ -1.83
TRIM55Q9BYV6 AC010469.2-201ENST00000496412 480 ntBASIC3.6□□□□□ -1.83
TRIM55Q9BYV6 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.6□□□□□ -1.83
TRIM55Q9BYV6 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.6□□□□□ -1.83
TRIM55Q9BYV6 RNU6-635P-201ENST00000516651 102 ntBASIC3.6□□□□□ -1.83
TRIM55Q9BYV6 AC026241.1-201ENST00000517873 2142 ntBASIC3.6□□□□□ -1.83
TRIM55Q9BYV6 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.6□□□□□ -1.83
TRIM55Q9BYV6 IGHV3-76-201ENST00000522465 295 ntBASIC3.6□□□□□ -1.83
TRIM55Q9BYV6 AC008011.1-201ENST00000545989 227 ntBASIC3.6□□□□□ -1.83
TRIM55Q9BYV6 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.6□□□□□ -1.83
TRIM55Q9BYV6 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.6□□□□□ -1.83
TRIM55Q9BYV6 MIR3922-201ENST00000585192 84 ntBASIC3.6□□□□□ -1.83
TRIM55Q9BYV6 AC125232.2-201ENST00000592457 143 ntBASIC3.6□□□□□ -1.83
TRIM55Q9BYV6 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.6□□□□□ -1.83
TRIM55Q9BYV6 RPL30P11-203ENST00000598995 310 ntBASIC3.6□□□□□ -1.83
TRIM55Q9BYV6 PRR13P7-201ENST00000605538 430 ntBASIC3.6□□□□□ -1.83
TRIM55Q9BYV6 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.6□□□□□ -1.83
TRIM55Q9BYV6 AC005296.1-201ENST00000616145 209 ntBASIC3.6□□□□□ -1.83
TRIM55Q9BYV6 U6.92-201ENST00000636464 89 ntBASIC3.6□□□□□ -1.83
TRIM55Q9BYV6 AC010329.5-201ENST00000623497 2174 ntBASIC3.6□□□□□ -1.83
TRIM55Q9BYV6 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
TRIM55Q9BYV6 AC068647.1-201ENST00000489539 2265 ntBASIC3.6□□□□□ -1.83
TRIM55Q9BYV6 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.6□□□□□ -1.83
TRIM55Q9BYV6 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
TRIM55Q9BYV6 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
TRIM55Q9BYV6 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TRIM55Q9BYV6 SNORD21-201ENST00000383953 95 ntBASIC3.59□□□□□ -1.83
TRIM55Q9BYV6 RNU6-318P-201ENST00000384283 103 ntBASIC3.59□□□□□ -1.83
TRIM55Q9BYV6 Y_RNA.471-201ENST00000384312 102 ntBASIC3.59□□□□□ -1.83
TRIM55Q9BYV6 MIR183-201ENST00000384958 110 ntBASIC3.59□□□□□ -1.83
TRIM55Q9BYV6 MIR34B-201ENST00000385076 84 ntBASIC3.59□□□□□ -1.83
TRIM55Q9BYV6 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.59□□□□□ -1.83
TRIM55Q9BYV6 AC017079.2-201ENST00000416102 485 ntBASIC3.59□□□□□ -1.83
TRIM55Q9BYV6 AL356968.1-201ENST00000416622 474 ntBASIC3.59□□□□□ -1.83
TRIM55Q9BYV6 MTCYBP9-201ENST00000431021 303 ntBASIC3.59□□□□□ -1.83
TRIM55Q9BYV6 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.59□□□□□ -1.83
TRIM55Q9BYV6 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.59□□□□□ -1.83
TRIM55Q9BYV6 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.59□□□□□ -1.83
TRIM55Q9BYV6 AC073910.1-201ENST00000445047 438 ntBASIC3.59□□□□□ -1.83
TRIM55Q9BYV6 RPS4XP2-201ENST00000458402 793 ntBASIC3.59□□□□□ -1.83
TRIM55Q9BYV6 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.59□□□□□ -1.83
TRIM55Q9BYV6 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.59□□□□□ -1.83
TRIM55Q9BYV6 MTCO2P24-201ENST00000515611 426 ntBASIC3.59□□□□□ -1.83
TRIM55Q9BYV6 RNU2-27P-201ENST00000516185 142 ntBASIC3.59□□□□□ -1.83
TRIM55Q9BYV6 AP006245.1-201ENST00000522549 120 ntBASIC3.59□□□□□ -1.83
TRIM55Q9BYV6 HSPE1P20-201ENST00000538133 289 ntBASIC3.59□□□□□ -1.83
TRIM55Q9BYV6 AC027176.1-201ENST00000560204 514 ntBASIC3.59□□□□□ -1.83
TRIM55Q9BYV6 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.59□□□□□ -1.83
TRIM55Q9BYV6 AC090517.1-201ENST00000569307 266 ntBASIC3.59□□□□□ -1.83
TRIM55Q9BYV6 MIR3200-201ENST00000580767 85 ntBASIC3.59□□□□□ -1.83
TRIM55Q9BYV6 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.59□□□□□ -1.83
TRIM55Q9BYV6 AP000942.4-201ENST00000604811 241 ntBASIC3.59□□□□□ -1.83
TRIM55Q9BYV6 RAC1P9-201ENST00000604990 392 ntBASIC3.59□□□□□ -1.83
TRIM55Q9BYV6 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.59□□□□□ -1.83
TRIM55Q9BYV6 AC022149.2-201ENST00000621061 203 ntBASIC3.59□□□□□ -1.83
TRIM55Q9BYV6 U6.105-201ENST00000637379 88 ntBASIC3.59□□□□□ -1.83
TRIM55Q9BYV6 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
TRIM55Q9BYV6 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TRIM55Q9BYV6 AC069528.2-201ENST00000624849 1991 ntBASIC3.58□□□□□ -1.84
TRIM55Q9BYV6 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
TRIM55Q9BYV6 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TRIM55Q9BYV6 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TRIM55Q9BYV6 RNA5SP361-201ENST00000362686 118 ntBASIC3.58□□□□□ -1.84
TRIM55Q9BYV6 Y_RNA.149-201ENST00000363558 117 ntBASIC3.58□□□□□ -1.84
TRIM55Q9BYV6 RNU6-873P-201ENST00000363833 107 ntBASIC3.58□□□□□ -1.84
TRIM55Q9BYV6 MIR491-201ENST00000384877 84 ntBASIC3.58□□□□□ -1.84
TRIM55Q9BYV6 MIR483-201ENST00000385070 76 ntBASIC3.58□□□□□ -1.84
TRIM55Q9BYV6 MIR549A-201ENST00000385268 96 ntBASIC3.58□□□□□ -1.84
TRIM55Q9BYV6 SNORA46.1-201ENST00000391069 153 ntBASIC3.58□□□□□ -1.84
TRIM55Q9BYV6 SDAD1P3-201ENST00000427380 333 ntBASIC3.58□□□□□ -1.84
TRIM55Q9BYV6 RPL30P4-201ENST00000429309 333 ntBASIC3.58□□□□□ -1.84
TRIM55Q9BYV6 RPEP5-201ENST00000441137 268 ntBASIC3.58□□□□□ -1.84
TRIM55Q9BYV6 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.58□□□□□ -1.84
TRIM55Q9BYV6 AC073901.1-201ENST00000462471 408 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms